RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 E7EQL1 145 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 SLC22A3O75751 556 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 IL6P05231 212 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 GKN3PP0CG01 181 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 CD40P25942 277 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 TTKP33981 857 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 MAP2K6P52564 334 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 WDR4P57081 412 aaKnown RBP13.53□□□□□ -0.24
TPM3-219ENST00000509409 COPZ1P61923 177 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 H3F3AP84243 136 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 TGFBR3Q03167 851 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 CEACAM7Q14002 265 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 RAB35Q15286 201 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 OR7A5Q15622 319 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 GSTA3Q16772 222 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 OTUD3Q5T2D3 398 aaPredicted RBP13.53□□□□□ -0.24
TPM3-219ENST00000509409 LSRQ86X29 649 aaPredicted RBP13.53□□□□□ -0.24
TPM3-219ENST00000509409 VRK2Q86Y07 508 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 CADM2Q8N3J6 435 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 OR52P1PQ8NH57 321 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 DHRS9Q9BPW9 319 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 CACNG6Q9BXT2 260 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 CALML5Q9NZT1 146 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 P2RX2Q9UBL9 471 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 ZNF232Q9UNY5 417 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 FLVCR1Q9Y5Y0 555 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 TLN2Q9Y4G6 2542 aa13.53□□□□□ -0.24
TPM3-219ENST00000509409 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 ZC3H12DA2A288 527 aaKnown RBP13.52□□□□□ -0.25
TPM3-219ENST00000509409 TMEM247A6NEH6 219 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 FAAHO00519 579 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 CRLF1O75462 422 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 GPIP06744 558 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 ITGA5P08648 1049 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 ETFAP13804 333 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 IDO1P14902 403 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 CDH2P19022 906 aaPredicted RBP13.52□□□□□ -0.25
TPM3-219ENST00000509409 NCF2P19878 526 aaPredicted RBP13.52□□□□□ -0.25
TPM3-219ENST00000509409 RPS4Y1P22090 263 aaKnown RBP13.52□□□□□ -0.25
TPM3-219ENST00000509409 NUDT6P53370 316 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 SPOCK1Q08629 439 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 SLC17A1Q14916 467 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 NRF1Q16656 503 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 LIN52Q52LA3 116 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 PDCD4Q53EL6 469 aaKnown RBP13.52□□□□□ -0.25
TPM3-219ENST00000509409 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 PAQR6Q6TCH4 344 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 AAED1Q7RTV5 226 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 MUC15Q8N387 334 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 TMEM99Q8N816 258 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 MDFIQ99750 246 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 TAPBPLQ9BX59 468 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 ADAM19Q9H013 955 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 YAE1D1Q9NRH1 226 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 SLC7A10Q9NS82 523 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 CBLN4Q9NTU7 201 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 NKIRAS1Q9NYS0 192 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 DCTN4Q9UJW0 460 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 DNHD1Q96M86 4753 aa13.52□□□□□ -0.25
TPM3-219ENST00000509409 ZANQ9Y493 2812 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 CADP27708 2225 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 SNNO75324 88 aaPredicted RBP13.51□□□□□ -0.25
TPM3-219ENST00000509409 KRT33AO76009 404 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 AKR7A3O95154 331 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 BCHEP06276 602 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 CRISP3P54108 245 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 DSTNP60981 165 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 IRX1P78414 480 aaPredicted RBP13.51□□□□□ -0.25
TPM3-219ENST00000509409 BNIP2Q12982 314 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 LARS2Q15031 903 aaKnown RBP13.51□□□□□ -0.25
TPM3-219ENST00000509409 TMEM225Q6GV28 225 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 WBP2NLQ6ICG8 309 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 KLHL24Q6TFL4 600 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 WDR31Q8NA23 367 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 ITCHQ96J02 903 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 ARMC7Q9H6L4 198 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 MANSC1Q9H8J5 431 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 FKRPQ9H9S5 495 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 SLC17A5Q9NRA2 495 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 AMDHD2Q9Y303 409 aa13.51□□□□□ -0.25
TPM3-219ENST00000509409 FAM234BA2RU67 622 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 CDHR4A6H8M9 788 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 LIPT2A6NK58 231 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 UBDO15205 165 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 WNT11O96014 354 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 THBS1P07996 1170 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 MPGP29372 298 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 PRPS1P60891 318 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 KRTAP1-1Q07627 177 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 MAPK11Q15759 364 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 C6orf10Q5SRN2 563 aa13.5□□□□□ -0.25
TPM3-219ENST00000509409 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms