RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 SLC1A3P43003 542 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 POLR2HP52434 150 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 SUCLG1P53597 346 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 CLDN20P56880 219 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 CARD18P57730 90 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 PON3Q15166 354 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 MAPK11Q15759 364 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 CYP51A1Q16850 503 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 CTU2Q2VPK5 515 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 SYT14P1Q58G82 188 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF311Q5JNZ3 666 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 WBP2NLQ6ICG8 309 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 ERICH5Q6P6B1 374 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 C5orf46Q6UWT4 87 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 NET1Q7Z628 596 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 CPLX4Q7Z7G2 160 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 PATL1Q86TB9 770 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 OR5M1Q8NGP8 315 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 LRRC58Q96CX6 371 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 STARD4Q96DR4 205 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 C12orf10Q9HB07 376 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 SLAMF8Q9P0V8 285 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 CHRNA9Q9UGM1 479 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 NDRG3Q9UGV2 375 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 SLC13A4Q9UKG4 626 aa8.19□□□□□ -1.1
UBE2D3-223ENST00000508249 A0A0J9YW62 118 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 GMNCA6NCL1 334 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 SHISA8B8ZZ34 492 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 MRASO14807 208 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CXCL13O43927 109 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 SNX3O60493 162 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 EIF1BO60739 113 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 PLGP00747 810 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CGAP01215 116 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 NUDT7P0C024 238 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 IL11P20809 199 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 PRDX6P30041 224 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 LSP1P33241 339 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 PCGF2P35227 344 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ACVR1BP36896 505 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CD79BP40259 229 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 IDH2P48735 452 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CTBP2P56545 445 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TOMM34Q15785 309 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF239Q16600 458 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 NDUFAF6Q330K2 333 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM176BQ3YBM2 270 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 REP15Q6BDI9 236 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF836Q6ZNA1 936 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF704Q6ZNC4 412 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TMPPEQ6ZT21 453 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF611Q8N823 705 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 OR6K3Q8NGY3 331 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 LILRB1Q8NHL6 650 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 NFKBIDQ8NI38 313 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 FNDC9Q8TBE3 224 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TMEM171Q8WVE6 324 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 FIG4Q92562 907 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CNOT9Q92600 299 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 OSTF1Q92882 214 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 DDIT4LQ96D03 193 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZG16BQ96DA0 208 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CMTM5Q96DZ9 223 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF845Q96IR2 970 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 MED18Q9BUE0 208 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 CCDC106Q9BWC9 280 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 PLA2G12AQ9BZM1 189 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TRIM2Q9C040 744 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 QRSL1Q9H0R6 528 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 KAT8Q9H7Z6 458 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ELOVL5Q9NYP7 299 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 ZNF226Q9NYT6 803 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 KLHL9Q9P2J3 617 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TESQ9UGI8 421 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 TRAPPC4Q9Y296 219 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 FREM1Q5H8C1 2179 aa8.18□□□□□ -1.1
UBE2D3-223ENST00000508249 FBP2O00757 339 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 TNFSF11O14788 317 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 HS3ST1O14792 307 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 FMO6PO60774 539 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 TMCC2O75069 709 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 NDUFS7O75251 213 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 PMS2P2O95744 297 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 IFNA14P01570 189 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 IGHV4-39P01824 125 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 C1QCP02747 245 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 SOD3P08294 240 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 DANCRP0C864 163 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 ENPP1P22413 925 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 RYKP34925 604 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 SFTPDP35247 375 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 THBS2P35442 1172 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 PCBP3P57721 371 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 MTPNP58546 118 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 NCALDP61601 193 aa8.17□□□□□ -1.1
UBE2D3-223ENST00000508249 GNGT1P63211 74 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms