RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 MUS81Q96NY9 551 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 OR52B2Q96RD2 323 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 TRAF4Q9BUZ4 470 aaPredicted RBP18.33■□□□□ 0.52
CLDND1-216ENST00000507944 ALG2Q9H553 416 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 TMBIM4Q9HC24 238 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 PRDM4Q9UKN5 801 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 SLC9A8Q9Y2E8 581 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 FLVCR1Q9Y5Y0 555 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 SLC25A15Q9Y619 301 aa18.33■□□□□ 0.52
CLDND1-216ENST00000507944 DSPPQ9NZW4 1301 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 A0A1W2PR80 420 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 BCHEP06276 602 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 TFPTP0C1Z6 253 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 CXCR1P25024 350 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 ACAA2P42765 397 aaKnown RBP18.32■□□□□ 0.52
CLDND1-216ENST00000507944 ZNF83P51522 516 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 POLR2JP52435 117 aaKnown RBP18.32■□□□□ 0.52
CLDND1-216ENST00000507944 CRISP3P54108 245 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 FOXG1P55316 489 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-216ENST00000507944 DSTNP60981 165 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 PPP2R2BQ00005 443 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 SLC17A1Q14916 467 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 GABRA6Q16445 453 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 LIN52Q52LA3 116 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 OR7E24Q6IFN5 339 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 PAQR6Q6TCH4 344 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 KLHL17Q6TDP4 642 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 TMEM108Q6UXF1 575 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 ZNF836Q6ZNA1 936 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 MSANTD1Q6ZTZ1 278 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-216ENST00000507944 SLC38A5Q8WUX1 472 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 GRIP2Q9C0E4 1043 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 FAIMQ9NVQ4 179 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 UPB1Q9UBR1 384 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 MGAT4BQ9UQ53 548 aa18.32■□□□□ 0.52
CLDND1-216ENST00000507944 ITGA5P08648 1049 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 PTAFRP25105 342 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 COPZ1P61923 177 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 CEACAM7Q14002 265 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 GTDC1Q4AE62 458 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 OTUD3Q5T2D3 398 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-216ENST00000507944 DTX2Q86UW9 622 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 OR9I1Q8NGQ6 314 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 VPS33AQ96AX1 596 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 AURKBQ96GD4 344 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-216ENST00000507944 SLCO5A1Q9H2Y9 848 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 SLC7A10Q9NS82 523 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 ZNF232Q9UNY5 417 aa18.31■□□□□ 0.52
CLDND1-216ENST00000507944 ZNF443Q9Y2A4 671 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-216ENST00000507944 LIPT2A6NK58 231 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 INAFM1C9JVW0 142 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 RNF223E7ERA6 249 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 PDLIM1O00151 329 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 KLF11O14901 512 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 NDUFS7O75251 213 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 ERLIN1O75477 346 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 IGHV4-39P01824 125 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 GPIP06744 558 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 THBS1P07996 1170 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 CD40P25942 277 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 ACVR1BP36896 505 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 LARS2Q15031 903 aaKnown RBP18.3■□□□□ 0.52
CLDND1-216ENST00000507944 OR7A5Q15622 319 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 ZSWIM7Q19AV6 140 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 RPS26P11Q5JNZ5 115 aaPredicted RBP18.3■□□□□ 0.52
CLDND1-216ENST00000507944 C6orf10Q5SRN2 563 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 C9orf135Q5VTT2 229 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 AGAP6Q5VW22 663 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 WBP2NLQ6ICG8 309 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 SLC22A25Q6T423 547 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 MIER2Q8N344 545 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 CLIP4Q8N3C7 705 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 CADM2Q8N3J6 435 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 TMEM99Q8N816 258 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 TMEM19Q96HH6 336 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 THUMPD1Q9NXG2 353 aaKnown RBP18.3■□□□□ 0.52
CLDND1-216ENST00000507944 DCTN4Q9UJW0 460 aa18.3■□□□□ 0.52
CLDND1-216ENST00000507944 CR1P17927 2039 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 A0A0G2JPF8 293 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 TMEM247A6NEH6 219 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 HNRNPCL2B2RXH8 293 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 HNRNPCL3B7ZW38 293 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 E7EQL1 145 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 M0R1B8 84 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
CLDND1-216ENST00000507944 AKR7A3O95154 331 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 HNRNPCL4P0DMR1 293 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 PTNP21246 168 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 BNIP2Q12982 314 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 BEND6Q5SZJ8 279 aaPredicted RBP18.29■□□□□ 0.52
CLDND1-216ENST00000507944 TSPO2Q5TGU0 170 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 RNF220Q5VTB9 566 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 WDR31Q8NA23 367 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 MAPK1IP1LQ8NDC0 245 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 TMEM45BQ96B21 275 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 HS6ST2Q96MM7 605 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 SF3B5Q9BWJ5 86 aaKnown RBP18.29■□□□□ 0.52
CLDND1-216ENST00000507944 C1QTNF6Q9BXI9 259 aa18.29■□□□□ 0.52
CLDND1-216ENST00000507944 REG4Q9BYZ8 158 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms