RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 ACVR1Q04771 509 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TRIP10Q15642 601 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 LIN52Q52LA3 116 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 RAB6CQ53S08 254 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PIGGQ5H8A4 983 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TECRLQ5HYJ1 363 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PDSS1Q5T2R2 415 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PIP5KL1Q5T9C9 394 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 MARC1Q5VT66 337 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 MFSD14CQ5VZR4 134 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 AP1ARQ63HQ0 302 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 C18orf63Q68DL7 685 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF470Q6ECI4 717 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ASPHD2Q6ICH7 369 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR52E8Q6IFG1 317 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 RWDD4Q6NW29 188 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 NEPROQ6NW34 567 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 DUS1LQ6P1R4 473 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 C19orf48Q6RUI8 117 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF704Q6ZNC4 412 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZCCHC23Q6ZST2 131 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 CMC1Q7Z7K0 106 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 YRDCQ86U90 279 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TAC4Q86UU9 113 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 COMTD1Q86VU5 262 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 KMT5CQ86Y97 462 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 RNF113BQ8IZP6 322 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 FAM9CQ8IZT9 166 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PYROXD2Q8N2H3 581 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TEX26Q8N6G2 289 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PCDH20Q8N6Y1 951 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ANKFN1Q8N957 763 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 THAP8Q8NA92 274 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR5M8Q8NGP6 311 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SPATA22Q8NHS9 363 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SPPL2BQ8TCT7 592 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 RAET1EQ8TD07 263 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 DTX3LQ8TDB6 740 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SAP25Q8TEE9 199 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 UBTD2Q8WUN7 234 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 CCDC107Q8WV48 283 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TSEN15Q8WW01 171 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 LZICQ8WZA0 190 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 EFHD2Q96C19 240 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 RAB39BQ96DA2 213 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 IMP4Q96G21 291 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 COQ2Q96H96 371 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PGLYRP2Q96PD5 576 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 DUX3Q96PT4 197 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 PKMYT1Q99640 499 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 NPAS2Q99743 824 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 HOPXQ9BPY8 73 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 OSBPL11Q9BXB4 747 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 NUSAP1Q9BXS6 441 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 MRPS26Q9BYN8 205 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TRIM4Q9C037 500 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 C20orf27Q9GZN8 174 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 RAB6CQ9H0N0 254 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 MFSD1Q9H3U5 465 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ACTL8Q9H568 366 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SLA2Q9H6Q3 261 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 WDR41Q9HAD4 459 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 GKN1Q9NS71 199 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 KLHL28Q9NXS3 571 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 NPAP1Q9NZP6 1156 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SEC14L3Q9UDX4 400 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 FBXL2Q9UKC9 423 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 FBXO5Q9UKT4 447 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 GAB2Q9UQC2 676 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SCML2Q9UQR0 700 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 ERVK-19Q9WJR5 959 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 WDR83OSQ9Y284 106 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 HES2Q9Y543 173 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 SCN8AQ9UQD0 1980 aa3.82□□□□□ -1.8
CALCOCO2-208ENST00000506971 TRAV18A0A075B6X5 111 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 TRAV26-1A0A087WT03 109 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 HYKKA2RU49 373 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 E9PAM4 449 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 FAM72CH0Y354 149 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF701M0R085 212 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PSMD12O00232 456 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 DFFAO00273 331 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 NTN3O00634 580 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ARPC1BO15143 372 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 UBDO15205 165 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ACSL4O60488 711 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF254O75437 659 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 LYPLA1O75608 230 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 PIAS1O75925 651 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 SRP72O76094 671 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 VAPBO95292 243 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CPNE6O95741 557 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 WDPCPO95876 746 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CSTAP01040 98 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 LDLRP01130 860 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 RAF1P04049 648 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 GPIP06744 558 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 CRYGCP07315 174 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 UMPSP11172 480 aa3.81□□□□□ -1.8
CALCOCO2-208ENST00000506971 GP9P14770 177 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms