RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RPL22L1Q6P5R6 122 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF836Q6ZNA1 936 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 MOB3CQ70IA8 216 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 CYB561A3Q8NBI2 242 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 C1orf216Q8TAB5 229 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 SYNPRQ8TBG9 265 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 RAB40AQ8WXH6 277 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 TRMT61BQ9BVS5 477 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 ESRP2Q9H6T0 727 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 TAS2R3Q9NYW6 316 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 SIGLEC7Q9Y286 467 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 TRBV2A0A0J9YWF9 115 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 KPNA3O00505 521 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 GOSR2O14653 212 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ADAM11O75078 769 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 CLEC3AO75596 197 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 UBBP0CG47 229 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 UBCP0CG48 685 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 RPS15P62841 145 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 RPS27AP62979 156 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 UBA52P62987 128 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ERVK-25P63136 954 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 LGALS3BPQ08380 585 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 COL9A2Q14055 689 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC9A5Q14940 896 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 RBMS2Q15434 407 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 GAREM2Q75VX8 874 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ADIPOR2Q86V24 386 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM239Q8WW34 195 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 HAVCR1Q96D42 359 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC35A4Q96G79 324 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 PDCD1LG2Q9BQ51 273 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC19A3Q9BZV2 496 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 POT1Q9NUX5 634 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ATG4BQ9Y4P1 393 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 INSL5Q9Y5Q6 135 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 COL4A6Q14031 1691 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 TRAPPC13A5PLN9 417 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF254O75437 659 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 MGMTP16455 207 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF3P17036 446 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 CDK2P24941 298 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ACTA2P62736 377 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ACTG2P63267 376 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ILF3Q12906 894 aaKnown RBP eCLIP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 LRRN1Q6UXK5 716 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 MUC20Q8N307 709 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 OR13C2Q8NGS9 318 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 TCEAL4Q96EI5 215 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 ACTRT3Q9BYD9 372 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 OR5V1Q9UGF6 321 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 MLXQ9UH92 298 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 CES1P1Q9UKY3 287 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 IRAK3Q9Y616 596 aa15.75■□□□□ 0.11
SQSTM1-211ENST00000506690 LRRK1Q38SD2 2015 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM272A0A1B0GTI8 110 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 A0A1W2PPV9 198 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 PRSS44E7EML9 344 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 LINC01387J3KSC0 135 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 LYPD3O95274 346 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 EGFP01133 1207 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 GABRR2P28476 465 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 VEGFBP49765 207 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 CLDN12P56749 244 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 TSSK4Q6SA08 328 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 TMPRSS11FQ6ZWK6 438 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM25Q86YD3 366 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 SLAIN1Q8ND83 568 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 OR4C6Q8NH72 309 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 ASB13Q8WXK3 278 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF514Q96K75 400 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 MENTQ9BUN1 341 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 PCBD2Q9H0N5 130 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 KLHL31Q9H511 634 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 MTHFD2LQ9H903 347 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 PQLC2LA1A4F0 135 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 LEFTY2O00292 366 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 ATG12O94817 140 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 CSNK2A2P19784 350 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 HTR2AP28223 471 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 UBE2MP61081 183 aaKnown RBP15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 CSNK1G2P78368 415 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 HTRA3P83110 453 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 SORDQ00796 357 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 RPE65Q16518 533 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF613Q6PF04 617 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 OR9A2Q8NGT5 310 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 C15orf40Q8WUR7 153 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 TFGQ92734 400 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC25A18Q9H1K4 315 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 IL36AQ9UHA7 158 aa15.74■□□□□ 0.11
SQSTM1-211ENST00000506690 RFPL4AA6NLU0 287 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 C4orf51C9J302 202 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 RFPL4AL1F8VTS6 287 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 AIFM1O95831 613 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 OR2T7P0C7T2 308 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 SELPP16109 830 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 CNR1P21554 472 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 NDUFS1P28331 727 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms