RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 S100A3P33764 101 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 SLC1A3P43003 542 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 SPOCK1Q08629 439 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 GGTLC2Q14390 218 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 IQCCQ4KMZ1 466 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 OTUD3Q5T2D3 398 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 TMEM225Q6GV28 225 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 UGT2A3Q6UWM9 527 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 AAED1Q7RTV5 226 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 ADGRG3Q86Y34 549 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 CCDC103Q8IW40 242 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 PEX5LQ8IYB4 626 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 WDR60Q8WVS4 1066 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 TMEM45BQ96B21 275 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 FBXO17Q96EF6 278 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 OR11A1Q9GZK7 315 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 MTHFD2LQ9H903 347 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 CALML5Q9NZT1 146 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 KCNE5Q9UJ90 142 aa18.44■□□□□ 0.54
SQSTM1-210ENST00000506042 LOC100289279A0A1B0GTE1 492 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 TMEM247A6NEH6 219 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 CFAP73A6NFT4 308 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 ZNF587BE7ETH6 402 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 PDE5AO76074 875 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 DBIP07108 87 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 EDNRAP25101 427 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 H3F3AP84243 136 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 PDCD2Q16342 344 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 CARTPTQ16568 116 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 C9orf135Q5VTT2 229 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 AP1ARQ63HQ0 302 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 SAXO2Q658L1 398 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 FRRS1Q6ZNA5 592 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 OR52E4Q8NGH9 312 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 RAB8BQ92930 207 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 ZBTB18Q99592 522 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 RAB1BQ9H0U4 201 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 SERHL2Q9H4I8 314 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 LGALS13Q9UHV8 139 aa18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-210ENST00000506042 CADP27708 2225 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 NUP214P35658 2090 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 A0A096LPI6 279 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 SCN2BO60939 215 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 C8BP07358 591 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 IGHV4-31P0DP07 118 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 NR2F1P10589 423 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 GTF2E2P29084 291 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 TACR3P29371 465 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 SH3BGRP55822 239 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 SLC17A1Q14916 467 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 MAPK14Q16539 360 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 PANX1Q96RD7 426 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 VRK1Q99986 396 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 KATNB1Q9BVA0 655 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 SLC7A10Q9NS82 523 aa18.42■□□□□ 0.54
SQSTM1-210ENST00000506042 A0A096LNT2 108 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 B9A039 149 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 E9PBE3 544 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 ATP6V1G2-DDX39BF2Z307 99 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 KRT75O95678 551 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 SERPINE1P05121 402 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 CDH2P19022 906 aaPredicted RBP18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 PCMT1P22061 227 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 SERPINF1P36955 418 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 TSPO2Q5TGU0 170 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 B3GLCTQ6Y288 498 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 LRRC74BQ6ZQY2 392 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 GPAT4Q86UL3 456 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 ANKRD46Q86W74 232 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 CLEC4FQ8N1N0 589 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 HTRA1Q92743 480 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 ZNF524Q96C55 264 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 TRIM44Q96DX7 344 aaPredicted RBP18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 AKTIPQ9H8T0 292 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 CHODLQ9H9P2 273 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 BTNL2Q9UIR0 455 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 OSGIN1Q9UJX0 560 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 MOKQ9UQ07 419 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 RAP2CQ9Y3L5 183 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 PCDHB14Q9Y5E9 798 aa18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 FBN1P35555 2871 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-210ENST00000506042 MXRA5Q9NR99 2828 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 CENPVL1A0A0U1RR11 272 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 AGAP5A6NIR3 686 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 PDLIM1O00151 329 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 HOXB1P14653 301 aaPredicted RBP18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 LBPP18428 481 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 NR4A2P43354 598 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 RPL14P50914 215 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 C3orf36Q3SXR2 165 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 WDR31Q8NA23 367 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 OR4F15Q8NGB8 312 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 OR9K2Q8NGE7 335 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 DNAJA3Q96EY1 480 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 PPP1R36Q96LQ0 422 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 SLC38A2Q96QD8 506 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 ZNF232Q9UNY5 417 aa18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 HEATR1Q9H583 2144 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-210ENST00000506042 BIRC5O15392 142 aa18.39■□□□□ 0.53
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