RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ZNF611Q8N823 705 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 PNPT1Q8TCS8 783 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 PERPQ96FX8 193 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 NAA11Q9BSU3 229 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 INPP5KQ9BT40 448 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 GSX2Q9BZM3 304 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 DLL4Q9NR61 685 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 TMEM181Q9P2C4 612 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 TRAPPC4Q9Y296 219 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 NOSIPQ9Y314 301 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 HEATR1Q9H583 2144 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 C9JVG2 144 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 FAAHO00519 579 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 CLOCKO15516 846 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF208O43345 1280 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 MRPL33O75394 65 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 UBOX5O94941 541 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 GGT1P19440 569 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 LOXP28300 417 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 IL12AP29459 219 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 CDKN2CP42773 168 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 SLC1A3P43003 542 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 OR2B6P58173 313 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 DSTNP60981 165 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 SLC35A1P78382 337 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 BNIP1Q12981 228 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 PPA1Q15181 289 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 TAB1Q15750 504 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 STK11Q15831 433 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 C6orf10Q5SRN2 563 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 MRPL2Q5T653 305 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ABLIM2Q6H8Q1 611 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 C22orf34Q6ZV56 151 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 FUNDC1Q8IVP5 155 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ANKFN1Q8N957 763 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 OR9I1Q8NGQ6 314 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 AKAP1Q92667 903 aaKnown RBP eCLIP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 FBXW5Q969U6 566 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZG16BQ96DA0 208 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 TRMT61AQ96FX7 289 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF300Q96RE9 604 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 SH3GL1Q99961 368 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 SLC38A1Q9H2H9 487 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 TPT1P8Q9HAU6 139 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 FAIMQ9NVQ4 179 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 PARPBPQ9NWS1 579 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF469Q96JG9 3925 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 IGKV3D-15A0A087WSY6 115 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TMED7-TICAM2A0A0A6YYA0 188 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 CIB4A0PJX0 185 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF814B7Z6K7 855 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 MRASO14807 208 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 LYZL6O75951 148 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 BCHEP06276 602 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 CHRM4P08173 479 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 CCNA2P20248 432 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 RPS4Y1P22090 263 aaKnown RBP9.23□□□□□ -0.93
NR1I3-222ENST00000506018 CXCR1P25024 350 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 PTH2RP49190 550 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TSC22D1Q15714 1073 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 KRTAP21-3Q3LHN1 58 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TIMM23BQ5SRD1 257 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 NCMAPQ5T1S8 102 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 FBXW9Q5XUX1 488 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ADAM5Q6NVV9 412 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 KLHL17Q6TDP4 642 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 C16orf89Q6UX73 402 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 CLEC9AQ6UXN8 241 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF771Q7L3S4 317 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-222ENST00000506018 HMGN2P46Q86SG4 172 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ADGRG3Q86Y34 549 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 POU5F2Q8N7G0 328 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 OR52P1PQ8NH57 321 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 CNOT9Q92600 299 aaKnown RBP9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF775Q96BV0 537 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF524Q96C55 264 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 RADILQ96JH8 1075 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 Q96MF0 132 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 HOPXQ9BPY8 73 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TMEM204Q9BSN7 226 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TAPBPLQ9BX59 468 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 C1orf21Q9H246 121 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ARL8BQ9NVJ2 186 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 ASB6Q9NWX5 421 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 PRSS50Q9UI38 385 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 SLC9A8Q9Y2E8 581 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 AP3M1Q9Y2T2 418 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 IFT52Q9Y366 437 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 TMED7Q9Y3B3 224 aa9.23□□□□□ -0.93
NR1I3-222ENST00000506018 NAV3Q8IVL0 2385 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 USF3Q68DE3 2245 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 A0A096LPI6 279 aa9.22□□□□□ -0.93
NR1I3-222ENST00000506018 A0A0G2JPF8 293 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms