RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ABHD4Q8TB40 342 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 AKR1E2Q96JD6 320 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 PTCHD1Q96NR3 888 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 SLC38A1Q9H2H9 487 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 HINT3Q9NQE9 182 aaKnown RBP7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 TMEM248Q9NWD8 314 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 CNOT2Q9NZN8 540 aaKnown RBP7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 SRPK3Q9UPE1 567 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 LAMA3Q16787 3333 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 KIAA1671Q9BY89 1806 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 A0A087WZY1 265 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 YY2O15391 372 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 CA12O43570 354 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 SNAPINO95295 136 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 UBBP0CG47 229 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 UBCP0CG48 685 aaKnown RBP7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 GJA4P35212 333 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 RAP2BP61225 183 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 TRAM1Q15629 374 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF705AQ6ZN79 300 aaPredicted RBP7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 GDPGP1Q6ZNW5 385 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 LRRC70Q7Z2Q7 622 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 GPR142Q7Z601 462 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 RANBP3LQ86VV4 465 aaPredicted RBP7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 CLDN22Q8N7P3 220 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 NECAP1Q8NC96 275 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 TMEM163Q8TC26 289 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 SCARB1Q8WTV0 552 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 SFT2D1Q8WV19 159 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 OSTF1Q92882 214 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 MRPL38Q96DV4 380 aaKnown RBP7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 OR52D1Q9H346 318 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 PRO3102Q9H379 93 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 SUV39H2Q9H5I1 410 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 UFSP2Q9NUQ7 469 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 IER3IP1Q9Y5U9 82 aa7.26□□□□□ -1.25
ATP2C1-208ENST00000504948 A0A1B0GTH9 108 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 TMEM235A6NFC5 223 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 XKRYO14609 159 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 EPCAMP16422 314 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ACRV1P26436 265 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 AOAHP28039 575 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 PRSS3P35030 304 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 PCGF2P35227 344 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 POU3F4P49335 361 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF140P52738 457 aaPredicted RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 C3orf33Q6P1S2 294 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 FRMD1Q8N878 549 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 OR5T2Q8NGG2 359 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 BRIX1Q8TDN6 353 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 TFGQ92734 400 aaPredicted RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZG16BQ96DA0 208 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 MRPL48Q96GC5 212 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 PELOQ9BRX2 385 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 GPR62Q9BZJ7 368 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 KCNJ16Q9NPI9 418 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 CALML5Q9NZT1 146 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF629Q9UEG4 869 aaPredicted RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 LAMP5Q9UJQ1 280 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 POMT2Q9UKY4 750 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF346Q9UL40 294 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 HEPACAM2A8MVW5 462 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 F13BP05160 661 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ACP2P11117 423 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ELNP15502 786 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 BDKRB2P30411 391 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 HLA-FP30511 346 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 TOMM20Q15388 145 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 DUSP28Q4G0W2 176 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 PLPP4Q5VZY2 271 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 PNLDC1Q8NA58 520 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF248Q8NDW4 579 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 OR9A2Q8NGT5 310 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZBTB8AQ96BR9 441 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 C5orf34Q96MH7 638 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 PITX2Q99697 317 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 MED18Q9BUE0 208 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 C12orf10Q9HB07 376 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 EMC7Q9NPA0 242 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 SLC2A4RGQ9NR83 387 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 UPB1Q9UBR1 384 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ERVW-1Q9UQF0 538 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 MROH6A6NGR9 719 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 CASC3O15234 703 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF208O43345 1280 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 B4GALT2O60909 372 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 YIF1AO95070 293 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 TSPAN12O95859 305 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 MMP7P09237 267 aaPredicted RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 GSTM3P21266 225 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 HMGCLP35914 325 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 CAV2P51636 162 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 AGFG1P52594 562 aaKnown RBP7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 EPHB3P54753 998 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 CLLU1Q5K131 121 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 HIST2H3PS2Q5TEC6 136 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 TCTN3Q6NUS6 607 aa7.25□□□□□ -1.25
ATP2C1-208ENST00000504948 ZNF679Q8IYX0 411 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms