RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 CDS1Q92903 461 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 TSLPQ969D9 159 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 COL21A1Q96P44 957 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 ZNF300Q96RE9 604 aaPredicted RBP5.54□□□□□ -1.52
COL4A5-207ENST00000504541 SEPHS2Q99611 448 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 EPYCQ99645 322 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 PIP5K1AQ99755 562 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 PKP2Q99959 881 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 PSD2Q9BQI7 771 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 KLHL4Q9C0H6 718 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 OR8D2Q9GZM6 311 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 VCXQ9H320 206 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 AKIRIN1Q9H9L7 192 aaPredicted RBP5.54□□□□□ -1.52
COL4A5-207ENST00000504541 HEYLQ9NQ87 328 aaPredicted RBP5.54□□□□□ -1.52
COL4A5-207ENST00000504541 EXOSC3Q9NQT5 275 aaKnown RBP5.54□□□□□ -1.52
COL4A5-207ENST00000504541 ASB6Q9NWX5 421 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 NDUFAF4Q9P032 175 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 C11orf21Q9P2W6 132 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 RIMS3Q9UJD0 308 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 ACAD8Q9UKU7 415 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 SLC35A3Q9Y2D2 325 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 PTRH2Q9Y3E5 179 aaKnown RBP5.54□□□□□ -1.52
COL4A5-207ENST00000504541 HS3ST3B1Q9Y662 390 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 ENPP4Q9Y6X5 453 aa5.54□□□□□ -1.52
COL4A5-207ENST00000504541 TP53BP1Q12888 1972 aaPredicted RBP5.54□□□□□ -1.52
COL4A5-207ENST00000504541 CROCCQ5TZA2 2017 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 NSG1A0A0A6YYJ2 146 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 A0A1W2PRQ8 180 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 OR2W5A6NFC9 320 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 H0Y3Z8 333 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 H3BNH8 94 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 SOCS6O14544 535 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 GNGT2O14610 69 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 EIF4E2O60573 245 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 TSPAN2O60636 221 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RAD1O60671 282 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 TIPRLO75663 272 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 UGT2B17O75795 530 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 OXSR1O95747 527 aaPredicted RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 HPRP00739 348 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 SERPINA7P05543 415 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ZNF26P17031 533 aaPredicted RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 KRT20P35900 424 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 TMED10P49755 219 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RPS6KA3P51812 740 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 EEF1A1P68104 462 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RPP38P78345 283 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ZNF155Q12901 538 aaPredicted RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 CHAF1BQ13112 559 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 SNTA1Q13424 505 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 DNASE1L3Q13609 305 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 DGCR6Q14129 220 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 NRF1Q16656 503 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RFX4Q33E94 735 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 CMPK2Q5EBM0 449 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 COLEC12Q5KU26 742 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ANKRD16Q6P6B7 361 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 FAM199XQ6PEV8 388 aaPredicted RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ENPP6Q6UWR7 440 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ZBTB49Q6ZSB9 765 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ZNF550Q7Z398 422 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 TSEN54Q7Z6J9 526 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RAB43Q86YS6 212 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 C9orf40Q8IXQ3 194 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 GPALPP1Q8IXQ4 340 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RNF113BQ8IZP6 322 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 SLC34A3Q8N130 599 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 BCORP1Q8N888 145 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 LSMEM1Q8N8F7 131 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 NAXEQ8NCW5 288 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 GPR32P1Q8NGA4 272 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 OR11G2Q8NGC1 345 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 OR5K1Q8NHB7 308 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 CT55Q8WUE5 264 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 RNF138Q8WVD3 245 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 THAP4Q8WY91 577 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 KIAA1143Q96AT1 154 aaPredicted RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 EME1Q96AY2 570 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 TMCO6Q96DC7 493 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 FER1L6-AS2Q96M78 137 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 HIST1H2AAQ96QV6 131 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ARHGDIGQ99819 225 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ITPAQ9BY32 194 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 DEFB126Q9BYW3 111 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 WWTR1Q9GZV5 400 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 NXF5Q9H1B4 397 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ANKRA2Q9H9E1 313 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 NTN4Q9HB63 628 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ASCL3Q9NQ33 180 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 EQTNQ9NQ60 294 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 USE1Q9NZ43 259 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 DKK4Q9UBT3 224 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 SLC13A4Q9UKG4 626 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 MKLN1Q9UL63 735 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 ABCG2Q9UNQ0 655 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 YARS2Q9Y2Z4 477 aaKnown RBP5.53□□□□□ -1.52
COL4A5-207ENST00000504541 SH3GLB1Q9Y371 365 aa5.53□□□□□ -1.52
COL4A5-207ENST00000504541 OR10H1Q9Y4A9 318 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms