RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 IGHV3OR16-12A0A075B7B8 117 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 TCRBV9S1A1TA0A576 114 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 CCT8L1PA6NM43 557 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 TCP11X1B4DZS4 312 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 E7ENQ6 273 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 GOLGA8MH3BSY2 632 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 AP3B1O00203 1094 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 TLR4O00206 839 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 EEF2KO00418 725 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 SH2D1BO14796 132 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 B3GAT3O94766 335 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 OLFM2O95897 454 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 IGLV3-25P01717 112 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 C1QAP02745 245 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 APRTP07741 180 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 GSTA1P08263 222 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 HSD17B1P14061 328 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 MAT2AP31153 395 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 CD52P31358 61 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 RPS4XP62701 263 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 DNAJC3Q13217 504 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 NAB1Q13506 487 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 EIF4EBP2Q13542 120 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 RUNX3Q13761 415 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 PKN2Q16513 984 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 PDK4Q16654 411 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 PARP6Q2NL67 630 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 BRMS1LQ5PSV4 323 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 ATAD3CQ5T2N8 411 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 SYPL2Q5VXT5 272 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 HIST2H2AA3Q6FI13 130 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 LRRC8BQ6P9F7 803 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 CCBE1Q6UXH8 406 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 ZNF600Q6ZNG1 722 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 ASRGL1Q7L266 308 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 SLC26A11Q86WA9 606 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 CCDC110Q8TBZ0 833 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 MYLPFQ96A32 169 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 DTD2Q96FN9 168 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 GLT1D1Q96MS3 346 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 SPATA13Q96N96 652 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 RANBP9Q96S59 729 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 VAT1Q99536 393 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 EBNA1BP2Q99848 306 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 FTHL17Q9BXU8 183 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 DMAP1Q9NPF5 467 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 TAS2R16Q9NYV7 291 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 APPL1Q9UKG1 709 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 CHMP2BQ9UQN3 213 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 IKBKGQ9Y6K9 419 aa4.43□□□□□ -1.7
UBE2D3-217ENST00000504211 AGRNO00468 2067 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 IGLV3-10A0A075B6K4 115 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TRAV9-2A0A087WT02 112 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 FAM159BA6NKW6 160 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 VEGFDO43915 354 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 MFSD11O43934 449 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 SRPX2O60687 465 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 ATP6V1G1O75348 118 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 BANF1O75531 89 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 IL1BP01584 269 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 APOEP02649 317 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 MT-ND3P03897 115 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TAC1P20366 129 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 UCP1P25874 307 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 RPA3P35244 121 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TRIM23P36406 574 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 IFNAR2P48551 515 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 RGS19P49795 217 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 SERPINB9P50453 376 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 CNN1P51911 297 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TPI1P60174 286 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 YWHAGP61981 247 aaKnown RBP eCLIP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 PPIAP62937 165 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 PPIDQ08752 370 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 WASHC5Q12768 1159 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 SMARCB1Q12824 385 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 IFT88Q13099 833 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 NME3Q13232 169 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 ABRAXAS2Q15018 415 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 LTB4RQ15722 352 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 DEFB115Q30KQ5 88 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 HHATQ5VTY9 493 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 PRAMEF7Q5VXH5 474 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 STEAP4Q687X5 459 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TIFABQ6ZNK6 161 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 CCDC121Q6ZUS5 278 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 LRRC6Q86X45 466 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 PYROXD2Q8N2H3 581 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 CHCHD4Q8N4Q1 142 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 COLGALT1Q8NBJ5 622 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 URGCPQ8TCY9 931 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 MGARPQ8TDB4 240 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 NDRG1Q92597 394 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 BIRC7Q96CA5 298 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TSGA13Q96PP4 275 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 PPP1R2P1Q96PQ5 205 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 MCCC1Q96RQ3 725 aaPredicted RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 TGS1Q96RS0 853 aaKnown RBP4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 KCNK16Q96T55 309 aa4.42□□□□□ -1.7
UBE2D3-217ENST00000504211 CUTCQ9NTM9 273 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms