RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GNB5O14775 395 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ARPC3O15145 178 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SURF4O15260 269 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 NKX2-8O15522 239 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 GMFGO60234 142 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 FAM20BO75063 409 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 FZD7O75084 574 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 BGLAPP02818 100 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TSPAN19P0C672 248 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 PRKAR1AP10644 381 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 PIPP12273 146 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 PEPDP12955 493 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 CD46P15529 392 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF3P17036 446 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 HK1P19367 917 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 PAICSP22234 425 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 NOS3P29474 1203 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TTKP33981 857 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 CD96P40200 585 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 RPL5P46777 297 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 NR1H2P55055 460 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 RPS4XP62701 263 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 EFNB1P98172 346 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 EGR4Q05215 589 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 FOXF1Q12946 379 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TMED1Q13445 227 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 OR1C1Q15619 314 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SGCBQ16585 318 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 CTU2Q2VPK5 515 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SYT14P1Q58G82 188 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 EMC4Q5J8M3 183 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 CLEC12AQ5QGZ9 265 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ARMC4Q5T2S8 1044 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF468Q5VIY5 522 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TMEM236Q5W0B7 351 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 GPR139Q6DWJ6 353 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ACSM5Q6NUN0 579 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF773Q6PK81 442 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ARSKQ6UWY0 536 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 Q6ZPB1 254 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 MDGA2Q7Z553 956 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 NANOGNBQ7Z5D8 188 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 GID4Q8IVV7 300 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 AMER2Q8N7J2 671 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TCEANCQ8N8B7 351 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TMEM178AQ8NBL3 297 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF540Q8NDQ6 660 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 BPIFB6Q8NFQ5 453 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 OR8D4Q8NGM9 314 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 OR13C2Q8NGS9 318 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 OR5J2Q8NH18 312 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 OR51A7Q8NH64 312 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 CNIH3Q8TBE1 160 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TMEM163Q8TC26 289 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TM9SF4Q92544 642 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 KTI12Q96EK9 354 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SAMD8Q96LT4 415 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 JSRP1Q96MG2 331 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 C5orf34Q96MH7 638 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TNFRSF13CQ96RJ3 184 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 IFT27Q9BW83 186 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SCNM1Q9BWG6 230 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 PLA2G12AQ9BZM1 189 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 PROK2Q9HC23 129 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 MCCC2Q9HCC0 563 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ZFP64Q9NPA5 681 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 CMC2Q9NRP2 79 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 QPCTLQ9NXS2 382 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 MRPL39Q9NYK5 338 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 GPR83Q9NYM4 423 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF226Q9NYT6 803 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 NDUFA13Q9P0J0 144 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 H2AFY2Q9P0M6 372 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 KLHL21Q9UJP4 597 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 FBXL2Q9UKC9 423 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 KLK13Q9UKR3 277 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 VDAC3Q9Y277 283 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TRAPPC4Q9Y296 219 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 SNX5Q9Y5X3 404 aa7.36□□□□□ -1.23
TOPBP1-202ENST00000503338 TRAV27A0A087WT01 109 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 TRIM64CA6NLI5 447 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 CLCA1A8K7I4 914 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 MASP2O00187 686 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 KLK10O43240 276 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 PRODHO43272 600 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 SEC14L5O43304 696 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 DNPH1O43598 174 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 TLX2O43763 284 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 WBP4O75554 376 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 NEURL1O76050 574 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 OR6A2O95222 327 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 WDPCPO95876 746 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 CD14P08571 375 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 TFPIP10646 304 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 FMO3P31513 532 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 IDUAP35475 653 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 RPL4P36578 427 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 RPS5P46782 204 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms