RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 TRIM62Q9BVG3 475 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ERVK-6Q9BXR3 956 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ZBP1Q9H171 429 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 KAT8Q9H7Z6 458 aaKnown RBP4.85□□□□□ -1.63
NEDD4-203ENST00000502612 PRODH2Q9UF12 536 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 CIDEBQ9UHD4 219 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 FOXJ3Q9UPW0 622 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF236Q9UL36 1845 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 SBF1O95248 1867 aa4.85□□□□□ -1.63
NEDD4-203ENST00000502612 PTPRFP10586 1907 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 GOLGA6L7A0A1B0GV03 622 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF840PA6NDX5 716 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 F8VP50 259 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 SGK494L7N484 410 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 HAS3O00219 553 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 SCGB2A1O75556 95 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 IFNB1P01574 187 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 ANXA4P09525 319 aaPredicted RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 RRASP10301 218 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 KCNE1P15382 129 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 PAICSP22234 425 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 IDSP22304 550 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 KDELR1P24390 212 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 HPDP32754 393 aaPredicted RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 CDKN2BP42772 138 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 AIF1P55008 147 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 MTTPP55157 894 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 MAGOHP61326 146 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 TRA2BP62995 288 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 SARNPP82979 210 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 HTD2P86397 168 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 ZBTB6Q15916 424 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 UAP1Q16222 522 aaPredicted RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 GOLGA7BQ2TAP0 167 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 KLHL38Q2WGJ6 581 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 MARCH8Q5T0T0 291 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 LGSNQ5TDP6 509 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 FBXL22Q6P050 247 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 LRRC31Q6UY01 552 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 TMEM110Q86TL2 294 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 PDIK1LQ8N165 341 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 TMEM86AQ8N2M4 240 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 BEST4Q8NFU0 473 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 RFESDQ8TAC1 157 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 DYDC1Q8WWB3 177 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 ADIPOR1Q96A54 375 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 TLCD1Q96CP7 247 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 TBC1D31Q96DN5 1066 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 C11orf24Q96F05 449 aaPredicted RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 ZNF670Q9BS34 389 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 MTG1Q9BT17 334 aaPredicted RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 WRAP53Q9BUR4 548 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 NEUROG2Q9H2A3 272 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 CDC42EP4Q9H3Q1 356 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 SMYD3Q9H7B4 428 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 ECT2Q9H8V3 914 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 LIN28AQ9H9Z2 209 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 HPF1Q9NWY4 346 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 NKIRAS1Q9NYS0 192 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 RSPH14Q9UHP6 348 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 STAP1Q9ULZ2 295 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 GINS2Q9Y248 185 aa4.84□□□□□ -1.63
NEDD4-203ENST00000502612 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.84□□□□□ -1.63
NEDD4-203ENST00000502612 LCTP09848 1927 aa4.84□□□□□ -1.64
NEDD4-203ENST00000502612 F8WDY8 70 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 AP3B1O00203 1094 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 PIRO00625 290 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ALOX15BO15296 676 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CHADO15335 359 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 TRAPPC3O43617 180 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 TYROBPO43914 113 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CST8O60676 142 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CABYRO75952 493 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 DIRAS3O95661 229 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 IQCF3P0C7M6 154 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 SLC35G4P0C7Q5 338 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 WARSP23381 471 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 BRCC3P46736 316 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 SLC18A1P54219 525 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CDH6P55285 790 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 EIF3EP60228 445 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 PPIAP62937 165 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 IL9RQ01113 521 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 OTUD4Q01804 1114 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 SLC25A11Q02978 314 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 XRCC4Q13426 336 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 EXOSC2Q13868 293 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 DPYSQ14117 519 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 EIF2B1Q14232 305 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ZIC1Q15915 447 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 XKR4Q5GH76 650 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 TWF2Q6IBS0 349 aaKnown RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ALKAL1Q6UXT8 129 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 Q7L0L9 218 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 STRADAQ7RTN6 431 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CDR2LQ86X02 465 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 CDKL3Q8IVW4 592 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-203ENST00000502612 ARL14Q8N4G2 192 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 OTUD6BQ8N6M0 293 aa4.83□□□□□ -1.64
NEDD4-203ENST00000502612 NFAM1Q8NET5 270 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms