RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 DDIT4LQ96D03 193 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 AURKBQ96GD4 344 aaPredicted RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 SLC35G5Q96KT7 338 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 SERHL2Q9H4I8 314 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 EXD2Q9NVH0 621 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 PCDHGB4Q9UN71 923 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 TMED7-TICAM2A0A0A6YYA0 188 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 TMEM233B4DJY2 109 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 PIP5K1BO14986 540 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 RGS9O75916 674 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 LGI1O95970 557 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 CECR9P0C854 216 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 IMPDH2P12268 514 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 HTR3AP46098 478 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 CCT5P48643 541 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 LGALS3BPQ08380 585 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 FAM153CQ494X1 144 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 OTUD3Q5T2D3 398 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 ANKRD16Q6P6B7 361 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 PAQR6Q6TCH4 344 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 TRMT10CQ7L0Y3 403 aaKnown RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 GLCCI1Q86VQ1 547 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 CLEC4FQ8N1N0 589 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 ARFGAP2Q8N6H7 521 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 KRTCAP2Q8N6L1 136 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 OR4F15Q8NGB8 312 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 UBASH3BQ8TF42 649 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 PMM1Q92871 262 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 COQ8BQ96D53 544 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 BOD1Q96IK1 185 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 ZNF385AQ96PM9 386 aaKnown RBP12.09□□□□□ -0.47
CCDC58-207ENST00000498466 C1orf50Q9BV19 199 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 DUSP26Q9BV47 211 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 TMED7Q9Y3B3 224 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 WDR45Q9Y484 360 aa12.09□□□□□ -0.47
CCDC58-207ENST00000498466 RNF103-CHMP3A0A140T963 221 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 TMEM72A0PK05 275 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 SH3PXD2BA1X283 911 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 B4DSR2 109 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 ZNF587BE7ETH6 402 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 ZNF208O43345 1280 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 NPR2P20594 1047 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 PAX7P23759 505 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 CALCRP30988 508 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 POLR2HP52434 150 aaKnown RBP12.08□□□□□ -0.48
CCDC58-207ENST00000498466 TUBA1BP68363 451 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 TUBA4AP68366 448 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 RIN1Q13671 783 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 ADRM1Q16186 407 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 ATP6AP1LQ52LC2 224 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 ATAD3BQ5T9A4 648 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
CCDC58-207ENST00000498466 SHQ1Q6PI26 577 aaKnown RBP12.08□□□□□ -0.48
CCDC58-207ENST00000498466 DEF8Q6ZN54 512 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 TUBA1AQ71U36 451 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 SPATA21Q7Z572 469 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 HMGN2P46Q86SG4 172 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 GPAT4Q86UL3 456 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 C10orf107Q8IVU9 208 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 CNPY4Q8N129 248 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 NOA1Q8NC60 698 aaKnown RBP12.08□□□□□ -0.48
CCDC58-207ENST00000498466 OR9K2Q8NGE7 335 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 OIT3Q8WWZ8 545 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 DOK1Q99704 481 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 GATA5Q9BWX5 397 aaPredicted RBP12.08□□□□□ -0.48
CCDC58-207ENST00000498466 OR51I1Q9H343 314 aa12.08□□□□□ -0.48
CCDC58-207ENST00000498466 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
CCDC58-207ENST00000498466 A0A096LPE4 126 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 A0A1W2PPZ6 126 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 TMEM89A2RUT3 159 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 CLDN24A6NM45 220 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 NR5A2O00482 541 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 AP3D1O14617 1153 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 OR12D1P0DN82 309 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 PRPS1L1P21108 318 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 CRHR1P34998 444 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 THBS4P35443 961 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 KCNJ10P78508 379 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 IL1RL1Q01638 556 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 PGS1Q32NB8 556 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
CCDC58-207ENST00000498466 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms