RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 DYNC1I1O14576 645 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 NPHS1O60500 1241 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 SKAP2O75563 359 aaPredicted RBP13.99□□□□□ -0.17
MUC1-220ENST00000498431 G6PDP11413 515 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 ZNF23P17027 643 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 MPGP29372 298 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 IL2RGP31785 369 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 IDH2P48735 452 aaKnown RBP13.99□□□□□ -0.17
MUC1-220ENST00000498431 CLK1P49759 484 aaKnown RBP13.99□□□□□ -0.17
MUC1-220ENST00000498431 PRPS1P60891 318 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 SNRPD2P62316 118 aaKnown RBP13.99□□□□□ -0.17
MUC1-220ENST00000498431 TGFBR3Q03167 851 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 SQLEQ14534 574 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 LIPNQ5VXI9 398 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 TNFAIP8L2Q6P589 184 aaPredicted RBP13.99□□□□□ -0.17
MUC1-220ENST00000498431 FRRS1Q6ZNA5 592 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 SLC46A3Q7Z3Q1 461 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 ZIC4Q8N9L1 334 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 XAGE5Q8WWM1 108 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 CNOT9Q92600 299 aaKnown RBP13.99□□□□□ -0.17
MUC1-220ENST00000498431 ZBTB9Q96C00 473 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 TMBIM4Q9HC24 238 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 PARPBPQ9NWS1 579 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 MID2Q9UJV3 735 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 TRAPPC4Q9Y296 219 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 WDR45Q9Y484 360 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 TMED7-TICAM2A0A0A6YYA0 188 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 PRAMEF27A3QJZ7 478 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 C1QCP02747 245 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 ITGA2P17301 1181 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 SERPINF1P36955 418 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 LGALS3BPQ08380 585 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 AP1ARQ63HQ0 302 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 SPATA19Q7Z5L4 167 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 ROPN1LQ96C74 230 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 ZNF385AQ96PM9 386 aaKnown RBP13.98□□□□□ -0.17
MUC1-220ENST00000498431 SAP130Q9H0E3 1048 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 CA10Q9NS85 328 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 EXD2Q9NVH0 621 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 ZDHHC2Q9UIJ5 367 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 OSGIN1Q9UJX0 560 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 TMED7Q9Y3B3 224 aa13.98□□□□□ -0.17
MUC1-220ENST00000498431 WIPF1O43516 503 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 SASH3O75995 380 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 WNT11O96014 354 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 SLC35A1P78382 337 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 KCNJ10P78508 379 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 RUNX1T1Q06455 604 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 ADIPOQQ15848 244 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 TNFAIP8L3Q5GJ75 292 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 VHLLQ6RSH7 139 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 KLHL24Q6TFL4 600 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 GOLGA6L1Q8N7Z2 621 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 OR4A15Q8NGL6 344 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 TMEM45BQ96B21 275 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 TUBGCP3Q96CW5 907 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 SLC38A2Q96QD8 506 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 SEC61A2Q9H9S3 476 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 MYOZ1Q9NP98 299 aaPredicted RBP13.97□□□□□ -0.17
MUC1-220ENST00000498431 EXOSC3Q9NQT5 275 aaKnown RBP13.97□□□□□ -0.17
MUC1-220ENST00000498431 ZNF446Q9NWS9 450 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 SLC17A7Q9P2U7 560 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 PCDHGB4Q9UN71 923 aa13.97□□□□□ -0.17
MUC1-220ENST00000498431 ATP8B1O43520 1251 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 TCF21O43680 179 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 EIF1BO60739 113 aaKnown RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 OR4A8P0C604 315 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 FKBP2P26885 142 aaKnown RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 TACR3P29371 465 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 CLDN8P56748 225 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 TUBA1BP68363 451 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 TUBA4AP68366 448 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 TBRG1Q3YBR2 411 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 OTUD3Q5T2D3 398 aaPredicted RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 ATAD3BQ5T9A4 648 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 AGBL2Q5U5Z8 902 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 PAQR6Q6TCH4 344 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 TUBA1AQ71U36 451 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 AAED1Q7RTV5 226 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 ANKRD46Q86W74 232 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 MEX3DQ86XN8 651 aaKnown RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 ZCCHC24Q8N2G6 241 aaKnown RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 RFLNBQ8N5W9 214 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 TMEM99Q8N816 258 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 OR9K2Q8NGE7 335 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 DDIT4LQ96D03 193 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 AURKBQ96GD4 344 aaPredicted RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 APOPT1Q96IL0 206 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 NAA11Q9BSU3 229 aaPredicted RBP13.96□□□□□ -0.17
MUC1-220ENST00000498431 PLK3Q9H4B4 646 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 POLE3Q9NRF9 147 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 MKS1Q9NXB0 559 aa13.96□□□□□ -0.17
MUC1-220ENST00000498431 B9A039 149 aa13.95□□□□□ -0.18
MUC1-220ENST00000498431 NR5A2O00482 541 aa13.95□□□□□ -0.18
MUC1-220ENST00000498431 RNASET2O00584 256 aaKnown RBP13.95□□□□□ -0.18
MUC1-220ENST00000498431 ZNF208O43345 1280 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms