RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	WDR54	Q9H977	334 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TMEM27	Q9HBJ8	222 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	UBAP1	Q9NZ09	502 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ACAD8	Q9UKU7	415 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	A4GNT	Q9UNA3	340 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NUP210L	Q5VU65	1888 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CENPE	Q02224	2701 aa		4.85	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ABCA2	Q9BZC7	2435 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325		A0A1W2PRQ8	180 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SH3PXD2B	A1X283	911 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	FRG2C	A6NGY1	282 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CPSF4L	A6NMK7	179 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	IDS	B3KWA1	339 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325		H3BNH8	94 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	AGRP	O00253	132 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SCD	O00767	359 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	BCKDK	O14874	412 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	FMO6P	O60774	539 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	REM1	O75628	298 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SEC24D	O94855	1032 aa	Predicted RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	IL33	O95760	270 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DDAH2	O95865	285 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	EPPIN	O95925	133 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ADA	P00813	363 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CLPS	P04118	112 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	IGKV3-11	P04433	115 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SFTPC	P11686	197 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CCL4	P13236	92 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GSTM3	P21266	225 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	IL12B	P29460	328 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SLC5A2	P31639	672 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	RYK	P34925	604 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CLK3	P49761	638 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PNLIPRP2	P54317	469 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	UGT2B15	P54855	530 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NRG3	P56975	720 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NUP107	P57740	925 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ESRRG	P62508	458 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	EEF1A1	P68104	462 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MYBPC1	Q00872	1141 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	IL5RA	Q01344	420 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	HGFAC	Q04756	655 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NPRL3	Q12980	569 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	EIF3I	Q13347	325 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PIN1	Q13526	163 aa	Predicted RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DGCR6	Q14129	220 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF141	Q15928	474 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ENTPD8	Q5MY95	495 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	RBM48	Q5RL73	367 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MRPL2	Q5T653	305 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	FAAH2	Q6GMR7	532 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TMEM205	Q6UW68	189 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF836	Q6ZNA1	936 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	PLEKHM3	Q6ZWE6	761 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	RAB11FIP2	Q7L804	512 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ANKRD37	Q7Z713	158 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GALNT5	Q7Z7M9	940 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MRGPRE	Q86SM8	312 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	RBM45	Q8IUH3	476 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	LACC1	Q8IV20	430 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CROCCP3	Q8IVE0	287 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF440	Q8IYI8	595 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CDK20	Q8IZL9	346 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF786	Q8N393	782 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CLIP4	Q8N3C7	705 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SLC5A8	Q8N695	610 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF614	Q8N883	585 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	BCORP1	Q8N888	145 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	BMPER	Q8N8U9	685 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	SLC38A9	Q8NBW4	561 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	C17orf47	Q8NEP4	570 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	B3GNT7	Q8NFL0	401 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR4N2	Q8NGD1	307 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR4D11	Q8NGI4	311 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	OR5L2	Q8NGL0	311 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	GNPDA2	Q8TDQ7	276 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NTN5	Q8WTR8	489 aa	Predicted RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MR1	Q95460	341 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	VMP1	Q96GC9	406 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	HS6ST2	Q96MM7	605 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MUS81	Q96NY9	551 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TAAR9	Q96RI9	348 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CCNL2	Q96S94	520 aa	Predicted RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MBOAT4	Q96T53	435 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	BARD1	Q99728	777 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CTRC	Q99895	268 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	CRB3	Q9BUF7	120 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	NUDT9	Q9BW91	350 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	DGCR6L	Q9BY27	220 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	MRPS26	Q9BYN8	205 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	UCK2	Q9BZX2	261 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	TRIM2	Q9C040	744 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	QRSL1	Q9H0R6	528 aa	Known RBP	4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	ZNF696	Q9H7X3	374 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	POLR1B	Q9H9Y6	1135 aa		4.84	□□□□□ -1.63
HMGXB4-208	ENST00000498325	APMAP	Q9HDC9	416 aa		4.84	□□□□□ -1.63

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