RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 C6orf203Q9P0P8 240 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-227ENST00000498056 SH3BGRL2Q9UJC5 107 aa12.2□□□□□ -0.46
CPNE1-227ENST00000498056 TRAV36DV7A0A075B6V5 113 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 A0A087WUU8 490 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 A0A0J9YW62 118 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SH3PXD2BA1X283 911 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 LRRN3E7EW58 273 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SULT2B1O00204 365 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 CXCL13O43927 109 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 OR10H3O60404 316 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 C1QL1O75973 258 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 CCNB2O95067 398 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF23P17027 643 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 GPR4P46093 362 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 DIO1P49895 249 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 MAP2K6P52564 334 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SUCLG1P53597 346 aaKnown RBP12.19□□□□□ -0.46
CPNE1-227ENST00000498056 OR2B6P58173 313 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SEC23BQ15437 767 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SGCBQ16585 318 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SOWAHCQ53LP3 525 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-227ENST00000498056 C1QL3Q5VWW1 255 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 HMBOX1Q6NT76 420 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF585AQ6P3V2 769 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 TBPL2Q6SJ96 375 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 CHERPQ8IWX8 916 aaKnown RBP12.19□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF843Q8N446 348 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 ST6GALNAC3Q8NDV1 305 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 OR4C15Q8NGM1 316 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 PIGXQ8TBF5 258 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 FAM57AQ8TBR7 257 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SLC25A36Q96CQ1 311 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 FAM46AQ96IP4 442 aaKnown RBP12.19□□□□□ -0.46
CPNE1-227ENST00000498056 PKP2Q99959 881 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 PTDSS2Q9BVG9 487 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 SLC19A3Q9BZV2 496 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 KLHL4Q9C0H6 718 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 MEPEQ9NQ76 525 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-227ENST00000498056 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 KIF17Q9P2E2 1029 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 HDGFL3Q9Y3E1 203 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 ESPL1Q14674 2120 aa12.19□□□□□ -0.46
CPNE1-227ENST00000498056 INTS1Q8N201 2190 aaKnown RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 SAC3D1A6NKF1 404 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 FIGNL2A6NMB9 653 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 B8ZZF3 427 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 PRRG2O14669 202 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 KALRNO60229 2985 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 SLC19A2O60779 497 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 NPIPB7O75200 414 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 PMS2P2O95744 297 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 CH25HO95992 272 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 IMPDH2P12268 514 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 FPR1P21462 350 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 FKBP2P26885 142 aaKnown RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 DNAJA1P31689 397 aaKnown RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 LIMS1P48059 325 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 CLDN15P56746 228 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 CSNK2A1P68400 391 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 BCL2A1Q16548 175 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF239Q16600 458 aaKnown RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 FAM69AQ5T7M9 428 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 LINC00114Q6XXX2 140 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 MBOAT2Q6ZWT7 520 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 PQLC1Q8N2U9 271 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 OR10G2Q8NGC3 310 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 TAAR8Q969N4 342 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 CPNE4Q96A23 557 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 SDCCAG3Q96C92 435 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 ZHX1-C8orf76Q96EF9 292 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 SGTBQ96EQ0 304 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF845Q96IR2 970 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-227ENST00000498056 ADGRG7Q96K78 797 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 MOGAT1Q96PD6 335 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 TRIB1Q96RU8 372 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 TUBA1CQ9BQE3 449 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 BDH2Q9BUT1 245 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 TMEM5Q9Y2B1 443 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 NBASA2RRP1 2371 aa12.18□□□□□ -0.46
CPNE1-227ENST00000498056 RP1L1Q8IWN7 2480 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 IGHV3-15A0A0B4J1V0 119 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 CLCA1A8K7I4 914 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 SYNGR4O95473 234 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 BGLAPP02818 100 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 SAGP10523 405 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 CPN1P15169 458 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 CLK1P49759 484 aaKnown RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 ARHGDIAP52565 204 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 NUP107P57740 925 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 IL1RL1Q01638 556 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 MRPL49Q13405 166 aaKnown RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 PON3Q15166 354 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF74Q16587 644 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 C3P1Q6ZMU1 363 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms