RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 DNAJA3Q96EY1 480 aa11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 DPY30Q9C005 99 aa11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 MYOZ1Q9NP98 299 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 OSGIN1Q9UJX0 560 aa11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 FKBP7Q9Y680 259 aa11.81□□□□□ -0.52
SPTAN1-209ENST00000497216 TMEM72A0PK05 275 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 CLDN24A6NM45 220 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 HMGN4O00479 90 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 SPAG7O75391 227 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 SRD5A1P18405 259 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 RPS4Y1P22090 263 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 SLC1A3P43003 542 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 ETV4P43268 484 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 NR4A2P43354 598 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 TXNL4AP83876 142 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 HPCAP84074 193 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 LRRC34Q8IZ02 419 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 ARIH2OSQ8N7S6 290 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 ZIC4Q8N9L1 334 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 POMGNT2Q8NAT1 580 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 SORCS2Q96PQ0 1159 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 TRNT1Q96Q11 434 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 C19orf24Q9BVV8 132 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 PRR14Q9BWN1 585 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 SLC38A1Q9H2H9 487 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 AKTIPQ9H8T0 292 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 KCNS2Q9ULS6 477 aa11.8□□□□□ -0.52
SPTAN1-209ENST00000497216 LOC390937A0A1W2PQ73 354 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 ZC3H12DA2A288 527 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 SLC35F4A4IF30 521 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 AP3D1O14617 1153 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 PDE5AO76074 875 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 LY6HO94772 140 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 CCNA2P20248 432 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 TACR3P29371 465 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 SNRPD2P62316 118 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 FAM120AOSQ5T036 256 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 KLHL24Q6TFL4 600 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 LRRC74BQ6ZQY2 392 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 ABHD12BQ7Z5M8 362 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 OR9K2Q8NGE7 335 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 MSI2Q96DH6 328 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 FBXO17Q96EF6 278 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 CCDC115Q96NT0 180 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 SLC35A5Q9BS91 424 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 ADAM19Q9H013 955 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 MARCOQ9UEW3 520 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 MOKQ9UQ07 419 aa11.79□□□□□ -0.52
SPTAN1-209ENST00000497216 IGHV1-18A0A0C4DH31 117 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 LOC100289279A0A1B0GTE1 492 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 LIPT2A6NK58 231 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 AQP7P3A6NL99 342 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 TYROBPO43914 113 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 SNUPNO95149 360 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 CPSF4O95639 269 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 GPIP06744 558 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 C8BP07358 591 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 UQCRBP14927 111 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 HNF1AP20823 631 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 CLNS1AP54105 237 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 EPS8Q12929 822 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 GSTA3Q16772 222 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 C3orf36Q3SXR2 165 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 SPANXN4Q5MJ08 99 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 OTUD3Q5T2D3 398 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 AAED1Q7RTV5 226 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 HMGN2P46Q86SG4 172 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 ZNF440Q8IYI8 595 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 WDR60Q8WVS4 1066 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 ZNF385AQ96PM9 386 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 ZNF317Q96PQ6 595 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 SLC38A2Q96QD8 506 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 KATNB1Q9BVA0 655 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 ROPN1BQ9BZX4 212 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 ROPN1Q9HAT0 212 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 BTNL2Q9UIR0 455 aa11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 FBXO9Q9UK97 447 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-209ENST00000497216 ARPC4-TTLL3A0A0A6YYG9 625 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 CFAP73A6NFT4 308 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 B9A039 149 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 E9PBE3 544 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 ITM2AO43736 263 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 SERPINE1P05121 402 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 DBIP07108 87 aaKnown RBP11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 CHRM4P08173 479 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 MYZAPP0CAP1 466 aa11.77□□□□□ -0.53
SPTAN1-209ENST00000497216 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms