RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TUSC5Q8IXB3 177 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 ZNF295-AS1Q8N0V1 137 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 ZNF610Q8N9Z0 462 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 ELOA3Q8NG57 546 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 OR52E4Q8NGH9 312 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 RNF217Q8TC41 542 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 TAMM41Q96BW9 452 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 OR11A1Q9GZK7 315 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 TMEM27Q9HBJ8 222 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 CRIM1Q9NZV1 1036 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 SLC9A8Q9Y2E8 581 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 CHST2Q9Y4C5 530 aa14.61□□□□□ -0.07
SF3A1-209ENST00000496189 CYSRT1A8MQ03 144 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 C16orf97H3BN30 126 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 CXCR6O00574 342 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 GPR171O14626 319 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 SMAD9O15198 467 aaKnown RBP14.6□□□□□ -0.07
SF3A1-209ENST00000496189 FRS3O43559 492 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 CYTIPO60759 359 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 GCM2O75603 506 aaPredicted RBP14.6□□□□□ -0.07
SF3A1-209ENST00000496189 GOSR1O95249 250 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 LGI1O95970 557 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 CGAP01215 116 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 OPN1SWP03999 348 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 EPXP11678 715 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 SNTB1Q13884 538 aaKnown RBP14.6□□□□□ -0.07
SF3A1-209ENST00000496189 DUSP7Q16829 419 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 LRRC23Q53EV4 343 aaPredicted RBP14.6□□□□□ -0.07
SF3A1-209ENST00000496189 C5orf46Q6UWT4 87 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 DEFB107AQ8IZN7 70 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 ARHGAP24Q8N264 748 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 DNAJA4Q8WW22 397 aaPredicted RBP14.6□□□□□ -0.07
SF3A1-209ENST00000496189 ARL5BQ96KC2 179 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 CDRT15Q96T59 188 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 MED18Q9BUE0 208 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 POTEKPQ9BYX7 375 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 KLHL4Q9C0H6 718 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 ADPRHL2Q9NX46 363 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 ZNF226Q9NYT6 803 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 EDARQ9UNE0 448 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 USP22Q9UPT9 525 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 PKDREJQ9NTG1 2253 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 CELSR2Q9HCU4 2923 aa14.6□□□□□ -0.07
SF3A1-209ENST00000496189 SH3D21A4FU49 640 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 AHSA1O95433 338 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 PNMTP11086 282 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 PRG2P13727 222 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 GLIPR1L2Q4G1C9 344 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 CYBRD1Q53TN4 286 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 GALNT5Q7Z7M9 940 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 ZNF100Q8IYN0 542 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 LINC01560Q8TB33 94 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 FAM162AQ96A26 154 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 C3orf49Q96BT1 292 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 DNAJA3Q96EY1 480 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 DACH2Q96NX9 599 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 PSD2Q9BQI7 771 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 BCO1Q9HAY6 547 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 C12orf10Q9HB07 376 aa14.59□□□□□ -0.07
SF3A1-209ENST00000496189 ADGRG4Q8IZF6 3080 aa14.58□□□□□ -0.07
SF3A1-209ENST00000496189 ZNF724A8MTY0 619 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 FMO6PO60774 539 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 HSD17B1P14061 328 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 PPP3CBP16298 524 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 CD247P20963 164 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 UGT2B10P36537 528 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 HOXC5Q00444 222 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 FAM27E3Q08E93 113 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 PDK3Q15120 406 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 ALG10BQ5I7T1 473 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 ABLIM2Q6H8Q1 611 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 ULK3Q6PHR2 472 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 ZNF474Q6S9Z5 364 aaPredicted RBP14.58□□□□□ -0.08
SF3A1-209ENST00000496189 LSMEM1Q8N8F7 131 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 RBM15BQ8NDT2 890 aaKnown RBP14.58□□□□□ -0.08
SF3A1-209ENST00000496189 STK35Q8TDR2 534 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 SLC47A1Q96FL8 570 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 LURAP1Q96LR2 239 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 ARHGDIGQ99819 225 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 POLDIP3Q9BY77 421 aaKnown RBP14.58□□□□□ -0.08
SF3A1-209ENST00000496189 C1orf21Q9H246 121 aa14.58□□□□□ -0.08
SF3A1-209ENST00000496189 C6orf203Q9P0P8 240 aaPredicted RBP14.58□□□□□ -0.08
SF3A1-209ENST00000496189 A6NNC1 897 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 UBOX5O94941 541 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 T-ENOLP0DO92 83 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 GGT1P19440 569 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 FPR1P21462 350 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 SELENOWP63302 87 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 CEACAM7Q14002 265 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 OR7A5Q15622 319 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 NRF1Q16656 503 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 OTUD3Q5T2D3 398 aaPredicted RBP14.57□□□□□ -0.08
SF3A1-209ENST00000496189 C1orf140Q5VVS0 124 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 PAQR6Q6TCH4 344 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 ATG4DQ86TL0 474 aaPredicted RBP14.57□□□□□ -0.08
SF3A1-209ENST00000496189 RNF148Q8N7C7 305 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 GPR32P1Q8NGA4 272 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 TPD52L3Q96J77 140 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 EPYCQ99645 322 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 HDHD5Q9BXW7 423 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms