RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 OGFOD3Q6PK18 319 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 RPTNQ6XPR3 784 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 TTLL10Q6ZVT0 673 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 SSX6Q7RTT6 188 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 NR2C2APQ86WQ0 139 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 OR5J2Q8NH18 312 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 OR14A16Q8NHC5 309 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 PHOSPHO1Q8TCT1 267 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 PTPMT1Q8WUK0 201 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-208ENST00000496116 GHSRQ92847 366 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 CLIP3Q96DZ5 547 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 SMIM19Q96E16 107 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 ZC3HAV1LQ96H79 300 aaKnown RBP10.14□□□□□ -0.79
CMSS1-208ENST00000496116 GPX7Q96SL4 187 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-208ENST00000496116 TMEM43Q9BTV4 400 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 CHRDQ9H2X0 955 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 RBFOX1Q9NWB1 397 aaKnown RBP10.14□□□□□ -0.79
CMSS1-208ENST00000496116 POU2F3Q9UKI9 436 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 ADAM18Q9Y3Q7 739 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 CLCA3PQ9Y6N3 262 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 HEATR5AQ86XA9 2040 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 LRRN3E7EW58 273 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF264O43296 627 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ARL6IP5O75915 188 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 TFP02787 698 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 RBMS1P29558 406 aaKnown RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 DDOSTP39656 456 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 KIR2DL3P43628 341 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 DIO1P49895 249 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 RPS4XP62701 263 aaKnown RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 IL10RAQ13651 578 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 UBXN2BQ14CS0 331 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 SF3A2Q15428 464 aaKnown RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CDONQ4KMG0 1287 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 FNDC7Q5VTL7 733 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NKAIN2Q5VXU1 208 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 TMEM151BQ8IW70 566 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CARFQ8N187 725 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 UBE2J2Q8N2K1 259 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 GATSQ8NAP1 163 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 SMAP2Q8WU79 429 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 THAP4Q8WY91 577 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NMNAT3Q96T66 252 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 LRRN3Q9H3W5 708 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CYSLTR2Q9NS75 346 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 LANCL2Q9NS86 450 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ST6GALNAC2Q9UJ37 374 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NPFFR2Q9Y5X5 522 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 A0A1W2PRG6 482 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 FRG2CA6NGY1 282 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 OGG1O15527 345 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 LYRM1O43325 122 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 SDC3O75056 442 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CD1AP06126 327 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 PSKH1P11801 424 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 RAB3BP20337 219 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NAA10P41227 235 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NXPH1P58417 271 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 SIRPAP78324 504 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 HSD11B2P80365 405 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 HSF2Q03933 536 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 SKP2Q13309 424 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CDK5R1Q15078 307 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CCDC58Q4VC31 144 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 TP53I3Q53FA7 332 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ATAD3CQ5T2N8 411 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 FAM27D1Q5T7N8 215 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 RPL22L1Q6P5R6 122 aaKnown RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ATG4DQ86TL0 474 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 JAZF1Q86VZ6 243 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 C10orf53Q8N6V4 93 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ZSCAN1Q8NBB4 408 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NPEPL1Q8NDH3 523 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 OR51L1Q8NGJ5 315 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 OR6K6Q8NGW6 343 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 LIPHQ8WWY8 451 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF486Q96H40 463 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 LCORQ96JN0 433 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 LMF1Q96S06 567 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 KCNJ15Q99712 375 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 CTRCQ99895 268 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 OR8D2Q9GZM6 311 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NDEL1Q9GZM8 345 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 PPIL3Q9H2H8 161 aaKnown RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 B3GAT2Q9NPZ5 323 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 NANSQ9NR45 359 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 ENAMQ9NRM1 1142 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 DDX28Q9NUL7 540 aaKnown RBP10.13□□□□□ -0.79
CMSS1-208ENST00000496116 RASD1Q9Y272 281 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 SLC6A5Q9Y345 797 aa10.13□□□□□ -0.79
CMSS1-208ENST00000496116 TRAV1-2A0A0B4J238 106 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 FAM240BA0A1B0GVZ2 78 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 BLOC1S5-TXNDC5H3BN57 136 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 GATBO75879 557 aaKnown RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 UTS2O95399 124 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 SPI1P17947 270 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 LCN1P31025 176 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 OR1D4P47884 311 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms