RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MTHFD2LQ9H903 347 aaPredicted RBP20.39■□□□□ 0.85
COL27A1-208ENST00000494780 SLC17A5Q9NRA2 495 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 ANK3Q12955 4377 aaKnown RBP20.38■□□□□ 0.85
COL27A1-208ENST00000494780 CCDC154A6NI56 674 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 ELOA3DA6NLF2 546 aaPredicted RBP20.38■□□□□ 0.85
COL27A1-208ENST00000494780 H7C417 338 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 GPRIN2O60269 458 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 CHRM4P08173 479 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 RPS4Y1P22090 263 aaKnown RBP20.38■□□□□ 0.85
COL27A1-208ENST00000494780 LOXL1Q08397 574 aaPredicted RBP20.38■□□□□ 0.85
COL27A1-208ENST00000494780 LRRC74AQ0VAA2 488 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 ELOA3BQ3SY89 546 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 CHRFAM7AQ494W8 412 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 PAQR6Q6TCH4 344 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 MREGQ8N565 214 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 ELOA3Q8NG57 546 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 TEX37Q96LM6 180 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 TNFRSF13CQ96RJ3 184 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 C1QTNF6Q9BXI9 259 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 FKRPQ9H9S5 495 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 SLC7A10Q9NS82 523 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 PRDM4Q9UKN5 801 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 ALPK2Q86TB3 2170 aa20.38■□□□□ 0.85
COL27A1-208ENST00000494780 CFAP73A6NFT4 308 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 DBIP07108 87 aaKnown RBP20.37■□□□□ 0.85
COL27A1-208ENST00000494780 BMP4P12644 408 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 IL7RP16871 459 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 BGNP21810 368 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 UFM1P61960 85 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 EPS8Q12929 822 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 STX3Q13277 289 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 GSTA3Q16772 222 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 MRPL2Q5T653 305 aaKnown RBP20.37■□□□□ 0.85
COL27A1-208ENST00000494780 TSPO2Q5TGU0 170 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 C9orf135Q5VTT2 229 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 TMEM45BQ96B21 275 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 REPIN1Q9BWE0 567 aaKnown RBP20.37■□□□□ 0.85
COL27A1-208ENST00000494780 AIG1Q9NVV5 245 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 ATP23Q9Y6H3 246 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 STAB1Q9NY15 2570 aa20.37■□□□□ 0.85
COL27A1-208ENST00000494780 MXRA5Q9NR99 2828 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 ZC3H12DA2A288 527 aaKnown RBP20.36■□□□□ 0.85
COL27A1-208ENST00000494780 PGRP06401 933 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 ALDOCP09972 364 aaKnown RBP20.36■□□□□ 0.85
COL27A1-208ENST00000494780 NR2F1P10589 423 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 SLC25A16P16260 332 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 NME5P56597 212 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 CHRNB3Q05901 458 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 TMEM249Q2WGJ8 235 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 C6orf52Q5T4I8 152 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 ZNF621Q6ZSS3 439 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 SPATA19Q7Z5L4 167 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 ZNF440Q8IYI8 595 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 ADAM19Q9H013 955 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 PNPOQ9NVS9 261 aa20.36■□□□□ 0.85
COL27A1-208ENST00000494780 RNF212BA8MTL3 300 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 MPGP29372 298 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 CDKN2CP42773 168 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 VLDLRP98155 873 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 SLC25A3Q00325 362 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 OTUD3Q5T2D3 398 aaPredicted RBP20.35■□□□□ 0.85
COL27A1-208ENST00000494780 ZNF525Q8N782 197 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 FAM168AQ92567 244 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 HTRA1Q92743 480 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 OR52E6Q96RD3 313 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 SF3B5Q9BWJ5 86 aaKnown RBP20.35■□□□□ 0.85
COL27A1-208ENST00000494780 PIF1Q9H611 641 aa20.35■□□□□ 0.85
COL27A1-208ENST00000494780 KRT75O95678 551 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 WNT11O96014 354 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 GPIP06744 558 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 IL12AP29459 219 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 APOBEC3AP31941 199 aaPredicted RBP20.34■□□□□ 0.85
COL27A1-208ENST00000494780 EFNA4P52798 201 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 PRPS1P60891 318 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 MPP2Q14168 576 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 COX20Q5RI15 118 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 PEX5LQ8IYB4 626 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 ZIC4Q8N9L1 334 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 POMGNT2Q8NAT1 580 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 OR9K2Q8NGE7 335 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 BOD1Q96IK1 185 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 PMF1-BGLAPU3KQ54 211 aa20.34■□□□□ 0.85
COL27A1-208ENST00000494780 LIPT2A6NK58 231 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 SDHDO14521 159 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 GSNP06396 782 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 CSF3P09919 207 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 CXCR1P25024 350 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 BST1Q10588 318 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 CEACAM7Q14002 265 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 KLHL24Q6TFL4 600 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 AAED1Q7RTV5 226 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 ABHD12BQ7Z5M8 362 aaPredicted RBP20.33■□□□□ 0.85
COL27A1-208ENST00000494780 TMEM99Q8N816 258 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 GLB1L3Q8NCI6 653 aaPredicted RBP20.33■□□□□ 0.85
COL27A1-208ENST00000494780 PNPT1Q8TCS8 783 aaKnown RBP20.33■□□□□ 0.85
COL27A1-208ENST00000494780 ZBTB18Q99592 522 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 KCNK9Q9NPC2 374 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 TMEM160Q9NX00 188 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 CDC42EP3Q9UKI2 254 aa20.33■□□□□ 0.85
COL27A1-208ENST00000494780 GPR45Q9Y5Y3 372 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms