RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 MSI2Q96DH6 328 aaKnown RBP12.78□□□□□ -0.36
PCCB-219ENST00000494742 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
PCCB-219ENST00000494742 MOKQ9UQ07 419 aa12.78□□□□□ -0.36
PCCB-219ENST00000494742 TMED7Q9Y3B3 224 aa12.78□□□□□ -0.36
PCCB-219ENST00000494742 ATP6V1G2-DDX39BF2Z307 99 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 SCN2BO60939 215 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 PDE5AO76074 875 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 LY6HO94772 140 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 IMPDH2P12268 514 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.37
PCCB-219ENST00000494742 UQCRBP14927 111 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 ARRB2P32121 409 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 SLC1A3P43003 542 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 KHKP50053 298 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 TXNL4AP83876 142 aaKnown RBP12.77□□□□□ -0.37
PCCB-219ENST00000494742 HPCAP84074 193 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 DPY19L1Q2PZI1 675 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 C9orf135Q5VTT2 229 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 LIPNQ5VXI9 398 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 TNFAIP8L2Q6P589 184 aaPredicted RBP12.77□□□□□ -0.37
PCCB-219ENST00000494742 RAB8BQ92930 207 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 TESCQ96BS2 214 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 ZG16BQ96DA0 208 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 FBXO17Q96EF6 278 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 NEURL3Q96EH8 262 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 SORCS2Q96PQ0 1159 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 ZNF317Q96PQ6 595 aaPredicted RBP12.77□□□□□ -0.37
PCCB-219ENST00000494742 KATNB1Q9BVA0 655 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 PRR14Q9BWN1 585 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 MOV10Q9HCE1 1003 aaKnown RBP12.77□□□□□ -0.37
PCCB-219ENST00000494742 SLC17A7Q9P2U7 560 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 OSGIN1Q9UJX0 560 aa12.77□□□□□ -0.37
PCCB-219ENST00000494742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.37
PCCB-219ENST00000494742 SLC35F4A4IF30 521 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 B9A039 149 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 HAX1O00165 279 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 CRYAAP02489 173 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 ZNF23P17027 643 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 CCNA2P20248 432 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 TACR3P29371 465 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 SERPINF1P36955 418 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 PLAURQ03405 335 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 FUT5Q11128 374 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 GNA13Q14344 377 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 GSTA3Q16772 222 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 GPAT3Q53EU6 434 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 TCP10LQ8TDR4 215 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 DNAJA3Q96EY1 480 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 TRNT1Q96Q11 434 aaKnown RBP12.76□□□□□ -0.37
PCCB-219ENST00000494742 KCNS3Q9BQ31 491 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 DPY30Q9C005 99 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
PCCB-219ENST00000494742 ANK2Q01484 3957 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 TMEM72A0PK05 275 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 AGAP5A6NIR3 686 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 OR6C65A6NJZ3 312 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 PGRP06401 933 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 GPIP06744 558 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 PPOXP50336 477 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 ANXA11P50995 505 aaKnown RBP12.75□□□□□ -0.37
PCCB-219ENST00000494742 CASP8Q14790 479 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 EFNB3Q15768 340 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
PCCB-219ENST00000494742 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 SLC46A3Q7Z3Q1 461 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 LRRC34Q8IZ02 419 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 ZIC4Q8N9L1 334 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 OR9K2Q8NGE7 335 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 CNOT9Q92600 299 aaKnown RBP12.75□□□□□ -0.37
PCCB-219ENST00000494742 FOXN4Q96NZ1 517 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 ADAM19Q9H013 955 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 MTHFD2LQ9H903 347 aaPredicted RBP12.75□□□□□ -0.37
PCCB-219ENST00000494742 CA10Q9NS85 328 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 MARCOQ9UEW3 520 aaPredicted RBP12.75□□□□□ -0.37
PCCB-219ENST00000494742 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
PCCB-219ENST00000494742 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 PRAMEF27A3QJZ7 478 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 CFAP73A6NFT4 308 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 LIPT2A6NK58 231 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 AQP7P3A6NL99 342 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 CLDN24A6NM45 220 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 HMGN4O00479 90 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 AP3D1O14617 1153 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 VAMP5O95183 116 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 CPSF4O95639 269 aaKnown RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 TGFAP01135 160 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 BPGMP07738 259 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 CHI3L1P36222 383 aaPredicted RBP12.74□□□□□ -0.37
PCCB-219ENST00000494742 IQCCQ4KMZ1 466 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 HIKESHIQ53FT3 197 aa12.74□□□□□ -0.37
PCCB-219ENST00000494742 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms