RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 SYT14Q8NB59 555 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 LSM14AQ8ND56 463 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 OR52E2Q8NGJ4 325 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 OR5W2Q8NH69 310 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF563Q8TA94 476 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ZPLD1Q8TCW7 415 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 GATAD2BQ8WXI9 593 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 PTP4A1Q93096 173 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 NACC2Q96BF6 587 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 RASD2Q96D21 266 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 TIMP4Q99727 224 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 KATNB1Q9BVA0 655 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ADAM19Q9H013 955 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 OR51V1Q9H2C8 321 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 MMP27Q9H306 513 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 NRIP3Q9NQ35 241 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 INPP5EQ9NRR6 644 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 RXFP3Q9NSD7 469 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 TXNL4BQ9NX01 149 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 HAO2Q9NYQ3 351 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 SSR3Q9UNL2 185 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 SLC6A5Q9Y345 797 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 CAB39Q9Y376 341 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 IER3IP1Q9Y5U9 82 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 TEX13CA0A0J9YWL9 993 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 TMEM200CA6NKL6 621 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 B4DXG7 233 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 MEN1O00255 615 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 GMFGO60234 142 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 WISP1O95388 367 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 BGLAPP02818 100 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 GYPBP06028 91 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 SBK2P0C263 348 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ASAH2BP0C7U1 165 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF883P0CG24 379 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 PGCP20142 388 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 P2RX1P51575 399 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ACTC1P68032 377 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ACTA1P68133 377 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF85Q03923 595 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 IL11RAQ14626 422 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 PCOLCEQ15113 449 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 QPRTQ15274 297 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 INAQ16352 499 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF528Q3MIS6 628 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 C16orf87Q6PH81 154 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 LYPD8Q6UX82 237 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 NUP54Q7Z3B4 507 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 NANOGNBQ7Z5D8 188 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ACBD7Q8N6N7 88 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 FAM98AQ8NCA5 519 aaKnown RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 AGBL5Q8NDL9 886 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 OR10H4Q8NGA5 316 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 OR4K13Q8NH42 304 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 OR8K3Q8NH51 312 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 METTL21AQ8WXB1 218 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 C8orf44Q96CB5 159 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 KTI12Q96EK9 354 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 DEPDC7Q96QD5 511 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 DCLRE1CQ96SD1 692 aaKnown RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 DDOQ99489 341 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 TBX5Q99593 518 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 LPAR4Q99677 370 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 PTDSS2Q9BVG9 487 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 BARHL1Q9BZE3 327 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 NMNAT2Q9BZQ4 307 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 C6orf62Q9GZU0 229 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 WDR54Q9H977 334 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 FKRPQ9H9S5 495 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 KLHL1Q9NR64 748 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 TAS2R10Q9NYW0 307 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 C19orf25Q9UFG5 118 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 NXT1Q9UKK6 140 aaKnown RBP9.69□□□□□ -0.86
CLCN6-208ENST00000494028 ZMIZ1Q9ULJ6 1067 aa9.69□□□□□ -0.86
CLCN6-208ENST00000494028 A0A075B6Q4 140 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 LOC102723996A0A087X1L8 192 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 TMEM72A0PK05 275 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 C4orf47A7E2U8 309 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 IMPA2O14732 288 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 SLC30A4O14863 429 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 KHNYNO15037 678 aaKnown RBP9.68□□□□□ -0.86
CLCN6-208ENST00000494028 DKK1O94907 266 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 TXNDC12O95881 172 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 GP1BAP07359 652 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 CD14P08571 375 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 GP1BBP13224 206 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 CCL4P13236 92 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 APEHP13798 732 aaKnown RBP9.68□□□□□ -0.86
CLCN6-208ENST00000494028 ACP1P24666 158 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 ATP6V1E1P36543 226 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 RPL4P36578 427 aaKnown RBP9.68□□□□□ -0.86
CLCN6-208ENST00000494028 AQP2P41181 271 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 GRK6P43250 576 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 POLR2HP52434 150 aaKnown RBP9.68□□□□□ -0.86
CLCN6-208ENST00000494028 SUMO3P55854 103 aaPredicted RBP9.68□□□□□ -0.86
CLCN6-208ENST00000494028 NRG3P56975 720 aa9.68□□□□□ -0.86
CLCN6-208ENST00000494028 FBXW4P57775 412 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms