RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SOCS6O14544 535 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 RFPL3O75679 317 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 SLC2A2P11168 524 aaPredicted RBP12.65□□□□□ -0.38
VCP-207ENST00000493886 SDHBP21912 280 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 ATP12AP54707 1039 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 BNC1Q01954 994 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 ASAH1Q13510 395 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 Q5BKY6 102 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 TRIQKQ629K1 86 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 RPL13AP3Q6NVV1 102 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 SMARCD3Q6STE5 483 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 QSOX2Q6ZRP7 698 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 ZNF615Q8N8J6 731 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 FRMD6Q96NE9 622 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 CUTCQ9NTM9 273 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 NLKQ9UBE8 527 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 SIGLEC7Q9Y286 467 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
VCP-207ENST00000493886 SDK1Q7Z5N4 2213 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 C12orf71A8MTZ7 269 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 SMLR1H3BR10 107 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 SULT1B1O43704 296 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
VCP-207ENST00000493886 OR2B3O76000 313 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 DDOSTP39656 456 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 SLC1A3P43003 542 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
VCP-207ENST00000493886 C19orf57Q0VDD7 668 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 QPRTQ15274 297 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 ALG10BQ5I7T1 473 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 TTLL10Q6ZVT0 673 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 LNX2Q8N448 690 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 BCORP1Q8N888 145 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 DNASE2BQ8WZ79 361 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 PELOQ9BRX2 385 aaKnown RBP12.65□□□□□ -0.38
VCP-207ENST00000493886 RNF121Q9H920 327 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 MED20Q9H944 212 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 ISYNA1Q9NPH2 558 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 ZC4H2Q9NQZ6 224 aa12.65□□□□□ -0.38
VCP-207ENST00000493886 IGHV1OR21-1A0A087WYE8 117 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 FAM172BPA6NC97 362 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 TMEM150CB9EJG8 249 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 CLPSP04118 112 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 GALNSP34059 522 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 TPBGQ13641 420 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 DSG2Q14126 1118 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 CDK10Q15131 360 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 ZMYND11Q15326 602 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 ZSWIM7Q19AV6 140 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 SLC35F1Q5T1Q4 408 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 PLBD1Q6P4A8 553 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 IL20RBQ6UXL0 311 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 ZNF550Q7Z398 422 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 KLBQ86Z14 1044 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 NEIL3Q8TAT5 605 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 ARHGAP9Q9BRR9 750 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 ZNF426Q9BUY5 554 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 LANCL2Q9NS86 450 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 GSTK1Q9Y2Q3 226 aa12.65□□□□□ -0.39
VCP-207ENST00000493886 TRAV27A0A087WT01 109 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 HMX3A6NHT5 357 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 OR6C70A6NIJ9 312 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 H3BMH7 237 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 BCAT2O15382 392 aaPredicted RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 SSX5O60225 188 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 OR1D4P47884 311 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 TATDN3Q17R31 274 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 PLET1Q6UQ28 207 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 GID4Q8IVV7 300 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 ZNF485Q8NCK3 441 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 C19orf18Q8NEA5 215 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 OR51G2Q8NGK0 314 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 SPRYD4Q8WW59 207 aaPredicted RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 SNX18Q96RF0 628 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 FN3KQ9H479 309 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 TEKT2Q9UIF3 430 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 HCN1O60741 890 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 CPNE3O75131 537 aaKnown RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 GABRA5P31644 462 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 RBM34P42696 430 aaKnown RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 ARL4DP49703 201 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 AFF3P51826 1226 aaKnown RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 HSD11B2P80365 405 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 CFHR1Q03591 330 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 ANKRD39Q53RE8 183 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 CMIPQ8IY22 773 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 OR4C3Q8NH37 302 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 OR51A7Q8NH64 312 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 ERVMER34-1Q9H9K5 563 aa12.64□□□□□ -0.39
VCP-207ENST00000493886 ISG20L2Q9H9L3 353 aaKnown RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 TP53BP1Q12888 1972 aaPredicted RBP12.64□□□□□ -0.39
VCP-207ENST00000493886 FAM86C2PA6NEL3 165 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 NUDT21O43809 227 aaKnown RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 PTP4A3O75365 173 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms