RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	WDR45	Q9Y484	360 aa		11.92	□□□□□ -0.5
SAMM50-204	ENST00000493161	NR5A2	O00482	541 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	OR4A8	P0C604	315 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TACR3	P29371	465 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TUBA1B	P68363	451 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TUBA4A	P68366	448 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	SLC35A1	P78382	337 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	KCNJ10	P78508	379 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TGFBR3	Q03167	851 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	ADIPOQ	Q15848	244 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	ZSWIM7	Q19AV6	140 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TUBA1A	Q71U36	451 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	LINGO2	Q7L985	606 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	ANKRD46	Q86W74	232 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	ARFGAP2	Q8N6H7	521 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TMEM99	Q8N816	258 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	OR4A15	Q8NGL6	344 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TUBGCP3	Q96CW5	907 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	AURKB	Q96GD4	344 aa	Predicted RBP	11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	SLC38A2	Q96QD8	506 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	EXD2	Q9NVH0	621 aa		11.91	□□□□□ -0.5
SAMM50-204	ENST00000493161	TCF21	O43680	179 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	EIF1B	O60739	113 aa	Known RBP	11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	SCN2B	O60939	215 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	AKR7A3	O95154	331 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	STAMBP	O95630	424 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	CPSF4	O95639	269 aa	Known RBP	11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	LGI1	O95970	557 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	WNT11	O96014	354 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	CALCR	P30988	508 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	CLDN8	P56748	225 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	TBRG1	Q3YBR2	411 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	KLHL24	Q6TFL4	600 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	AAED1	Q7RTV5	226 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	OR9K2	Q8NGE7	335 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	TMEM45B	Q96B21	275 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	DDIT4L	Q96D03	193 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	NAA11	Q9BSU3	229 aa	Predicted RBP	11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	PLA2G12A	Q9BZM1	189 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	PLK3	Q9H4B4	646 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	EXOSC3	Q9NQT5	275 aa	Known RBP	11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161	MID2	Q9UJV3	735 aa		11.9	□□□□□ -0.5
SAMM50-204	ENST00000493161		B9A039	149 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	RNASET2	O00584	256 aa	Known RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	ZNF208	O43345	1280 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	LILRA1	O75019	489 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	SPAG7	O75391	227 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	GUSB	P08236	651 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	IGFBP1	P08833	259 aa	Predicted RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	FKBP2	P26885	142 aa	Known RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	POLR2H	P52434	150 aa	Known RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	NAAA	Q02083	359 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	CEACAM7	Q14002	265 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	GPAT3	Q53EU6	434 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	ATAD3B	Q5T9A4	648 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	SAXO2	Q658L1	398 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	ANKRD16	Q6P6B7	361 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	PAQR6	Q6TCH4	344 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	MYPOP	Q86VE0	399 aa	Predicted RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	MEX3D	Q86XN8	651 aa	Known RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	CNPY4	Q8N129	248 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	RFLNB	Q8N5W9	214 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	ANKFN1	Q8N957	763 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	OR1K1	Q8NGR3	316 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	BOD1	Q96IK1	185 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	APOPT1	Q96IL0	206 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	PPP1R36	Q96LQ0	422 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	POLE3	Q9NRF9	147 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	PCDHGB4	Q9UN71	923 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161	TENM1	Q9UKZ4	2725 aa		11.89	□□□□□ -0.51
SAMM50-204	ENST00000493161		A0A096LPE4	126 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161		A0A1W2PPZ6	126 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	LIPT2	A6NK58	231 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	LYNX1	G3V0Z9	82 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	HMGN4	O00479	90 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	CELA3B	P08861	270 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	CECR9	P0C854	216 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	LYNX1	P0DP58	116 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	DAO	P14920	347 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	UQCRC2	P22695	453 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	GIF	P27352	417 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	CFP	P27918	469 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	HTR3A	P46098	478 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	SELENOP	P49908	381 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	IDH3G	P51553	393 aa	Predicted RBP	11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	P2RY4	P51582	365 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	EMX2	Q04743	252 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	HGFAC	Q04756	655 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	BNIP2	Q12982	314 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	OR7A5	Q15622	319 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	TRIP10	Q15642	601 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	EFNB3	Q15768	340 aa		11.88	□□□□□ -0.51
SAMM50-204	ENST00000493161	SYPL1	Q16563	259 aa		11.88	□□□□□ -0.51

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