RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ACBD7Q8N6N7 88 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF485Q8NCK3 441 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 OR52N1Q8NH53 320 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 DUSP19Q8WTR2 217 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 RNF138Q8WVD3 245 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 KISS1RQ969F8 398 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 DACH2Q96NX9 599 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 SECISBP2Q96T21 854 aaKnown RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 KLHDC3Q9BQ90 382 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ARHGAP9Q9BRR9 750 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF649Q9BS31 505 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 CENPOQ9BU64 300 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 HCAR1Q9BXC0 346 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 STRADBQ9C0K7 418 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 NDEL1Q9GZM8 345 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 INPP5EQ9NRR6 644 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ERVK13-1Q9NX77 482 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 MYOTQ9UBF9 498 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 SLC6A5Q9Y345 797 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 CCDC182A6NF36 153 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF354AO60765 605 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 GPX5O75715 221 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 TSPAN19P0C672 248 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 CD59P13987 128 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 TGFBR1P36897 503 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 HTR3AP46098 478 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 SUMO3P55854 103 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 FBXW4P57775 412 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 E2F1Q01094 437 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 ACSM1Q08AH1 577 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 POU4F2Q12837 409 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 PCOLCEQ15113 449 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 QPRTQ15274 297 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 TOMM34Q15785 309 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 KLHL12Q53G59 568 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 OR2G6Q5TZ20 316 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 FCRLBQ6BAA4 426 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 GRINAQ7Z429 371 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 AMER2Q8N7J2 671 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 OR52E2Q8NGJ4 325 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 OR51G2Q8NGK0 314 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 SLC22A8Q8TCC7 542 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 ELP5Q8TE02 316 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 GATAD2BQ8WXI9 593 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 TMEM234Q8WY98 164 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 MOGAT1Q96PD6 335 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 ZPBPQ9BS86 351 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 DEFB126Q9BYW3 111 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 SLIRPQ9GZT3 109 aaKnown RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF700Q9H0M5 742 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 OR51V1Q9H2C8 321 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 FKRPQ9H9S5 495 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 TAS2R10Q9NYW0 307 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF229Q9UJW7 825 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 CAB39Q9Y376 341 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 PTRH2Q9Y3E5 179 aaKnown RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 SPIN1Q9Y657 262 aaPredicted RBP12.77□□□□□ -0.36
PTPN7-216ENST00000492977 A3GALT2U3KPV4 340 aa12.77□□□□□ -0.36
PTPN7-216ENST00000492977 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 MPDZO75970 2070 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 TRAV36DV7A0A075B6V5 113 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 CDX4O14627 284 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 IMPA2O14732 288 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 HIST1H2ABP04908 130 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 UMODP07911 640 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 FBXO45P0C2W1 286 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 CRYBB2P43320 205 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 BMXP51813 675 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 EXT1Q16394 746 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 COL28A1Q2UY09 1125 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 HIST3H2AQ7L7L0 130 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 SIRT6Q8N6T7 355 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 FAM98AQ8NCA5 519 aaKnown RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 HIST1H2ACQ93077 130 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 BORCS5Q969J3 196 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 PMEPA1Q969W9 287 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 SIAEQ9HAT2 523 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
PTPN7-216ENST00000492977 SSR3Q9UNL2 185 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 R4GN57 208 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 PMF1-BGLAPU3KQ54 211 aa12.77□□□□□ -0.37
PTPN7-216ENST00000492977 IGHV1-45A0A0A0MS14 117 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 ANKUB1A6NFN9 424 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 BLOC1S5-TXNDC5H3BN57 136 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 AKAP8O43823 692 aaKnown RBP12.76□□□□□ -0.37
PTPN7-216ENST00000492977 GMFGO60234 142 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 SLC25A12O75746 678 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 MT-ATP6P00846 226 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms