RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RPS17P08708 135 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 NR2F6P10588 404 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 NID1P14543 1247 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF708P17019 499 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 MSX2P35548 267 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 PIK3CBP42338 1070 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 CBX5P45973 191 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 RPS13P62277 151 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 POU4F1Q01851 419 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 TNK1Q13470 666 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 DDX39BQ13838 428 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 SPANXN2Q5MJ10 180 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 FAM205BPQ63HN1 556 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 GRHL2Q6ISB3 625 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF782Q6ZMW2 699 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 SPATC1Q76KD6 591 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 PIWIL3Q7Z3Z3 882 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 METTL4Q8N3J2 472 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 OR14L1PQ8NHC6 308 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 ST6GAL2Q96JF0 529 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 MUS81Q96NY9 551 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 RBM4BQ9BQ04 359 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 MED18Q9BUE0 208 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 RBM4Q9BWF3 364 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 NUAK2Q9H093 628 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 METTL7AQ9H8H3 244 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 ZC4H2Q9NQZ6 224 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 LYARQ9NX58 379 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 TAS2R9Q9NYW1 312 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 CD274Q9NZQ7 290 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 EIF3KQ9UBQ5 218 aaKnown RBP11.82□□□□□ -0.52
HDAC3-213ENST00000492506 ADGRE2Q9UHX3 823 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 DLGAP4Q9Y2H0 992 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 AP3M1Q9Y2T2 418 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 LRRC14BA6NHZ5 514 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 B4DXG7 233 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 SLC1A7O00341 560 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 ARPC2O15144 300 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 TBX1O43435 398 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 NDUFA2O43678 99 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 SNAP29O95721 258 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 CGAP01215 116 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 CRHP06850 196 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-213ENST00000492506 SNTA1Q13424 505 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 GPR50Q13585 617 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 CYP51A1Q16850 503 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 HEPHL1Q6MZM0 1159 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 SCIMPQ6UWF3 145 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 PLEKHM3Q6ZWE6 761 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF550Q7Z398 422 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 NUP54Q7Z3B4 507 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 IFNEQ86WN2 208 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 FAM156AQ8NDB6 213 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 RNF170Q96K19 258 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 OPN3Q9H1Y3 402 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-213ENST00000492506 ACTR8Q9H981 624 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 PAQR5Q9NXK6 330 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-213ENST00000492506 PTTG3PQ9NZH4 202 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 RNF112Q9ULX5 631 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 SVEP1Q4LDE5 3571 aa11.81□□□□□ -0.52
HDAC3-213ENST00000492506 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
HDAC3-213ENST00000492506 TCRBV5S2A0A599 114 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF780AO75290 641 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-213ENST00000492506 ALPLP05186 524 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 PTX3P26022 381 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-213ENST00000492506 HLA-DMAP28067 261 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 ELK4P28324 431 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 SOX6P35712 828 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 CLDN15P56746 228 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 MGAT2Q10469 447 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 NNATQ16517 81 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 GDPD3Q7L5L3 318 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 ZDHHC13Q8IUH4 622 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 VPS37AQ8NEZ2 397 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 UBTD2Q8WUN7 234 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-213ENST00000492506 SLC38A4Q969I6 547 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 LGALS12Q96DT0 336 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 MRPL57Q9BQC6 102 aaKnown RBP11.8□□□□□ -0.52
HDAC3-213ENST00000492506 BTBD2Q9BX70 525 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 DGCR6LQ9BY27 220 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 ELOVL5Q9NYP7 299 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 TAS2R10Q9NYW0 307 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 GLS2Q9UI32 602 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 FBXL2Q9UKC9 423 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 LYVE1Q9Y5Y7 322 aa11.8□□□□□ -0.52
HDAC3-213ENST00000492506 EFCAB9A8MZ26 197 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 C16orf97H3BN30 126 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 CTDSP2O14595 271 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SLC16A6O15403 523 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 KLF4O43474 513 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ZIC3O60481 467 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 GBAP04062 536 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 HMGN1P05114 100 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms