RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RTL4Q6ZR62 310 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 SLC35B4Q969S0 331 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 DEPDC7Q96QD5 511 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 RNF121Q9H920 327 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 LMAN1LQ9HAT1 526 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 RPRD1BQ9NQG5 326 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 CHRNA9Q9UGM1 479 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ING1Q9UK53 422 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 TMEM5Q9Y2B1 443 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 AK6Q9Y3D8 172 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 IGKV1D-42A0A075B6H8 117 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 A0A1B0GTH9 108 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 FAM221BA6H8Z2 402 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ACOD1A6NK06 481 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 EEF1E1O43324 174 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 FMO6PO60774 539 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 PRAMEF2O60811 474 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 CTNSO60931 367 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 RPP14O95059 124 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 AK1P00568 194 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 CLPSP04118 112 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 CD1CP29017 333 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 THBS2P35442 1172 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 INPP1P49441 399 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 CSNK1EP49674 416 aaKnown RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ATP12AP54707 1039 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ZFP69Q49AA0 526 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ACSM3Q53FZ2 586 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 C6orf183Q5T699 404 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ZCCHC12Q6PEW1 402 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 CEP76Q8TAP6 659 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 FAM174AQ8TBP5 190 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 SGTBQ96EQ0 304 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 PELI1Q96FA3 418 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 HSPA12BQ96MM6 686 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 ADOQ96SZ5 270 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 NKX3-1Q99801 234 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-220ENST00000492280 TRIM2Q9C040 744 aa11.4□□□□□ -0.58
HMGN1-220ENST00000492280 A0A0G2JK05 382 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 FAM240BA0A1B0GVZ2 78 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 DCTN6O00399 190 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 LYRM1O43325 122 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 QPRTQ15274 297 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 VWA2Q5GFL6 755 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ULK3Q6PHR2 472 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 KRT74Q7RTS7 529 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 TDHQ8IZJ6 230 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ZSCAN1Q8NBB4 408 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 TRMT10AQ8TBZ6 339 aaKnown RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 FKRPQ9H9S5 495 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 POLHQ9Y253 713 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 MRPS33Q9Y291 106 aaKnown RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ALG5Q9Y673 324 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 CACNA1EQ15878 2313 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 KIF26BQ2KJY2 2108 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ZDBF2Q9HCK1 2354 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 NPIPB9F8W1W9 429 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 NDUFB2O95178 105 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ADRB1P08588 477 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 CLDN12P56749 244 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 OR1D5P58170 312 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ZP2Q05996 745 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ACSM1Q08AH1 577 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 C1QL3Q5VWW1 255 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ARHGAP11AQ6P4F7 1023 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 PLET1Q6UQ28 207 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 C16orf47Q6ZP98 133 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 KANSL1Q7Z3B3 1105 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 GPR135Q8IZ08 494 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF615Q8N8J6 731 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 FRMD6Q96NE9 622 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 GALNT9Q9HCQ5 603 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 MKKSQ9NPJ1 570 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 GPR27Q9NS67 375 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 C14orf105Q9NVL8 296 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 PAQR5Q9NXK6 330 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-220ENST00000492280 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
HMGN1-220ENST00000492280 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 TMEM150CB9EJG8 249 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 CLDN4O14493 209 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 CD3GP09693 182 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 HPGDP15428 266 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 ATF1P18846 271 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 GDI2P50395 445 aaKnown RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 BLKP51451 505 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 CCR5P51681 352 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 HBMQ6B0K9 141 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 LEG1Q6P5S2 330 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 SLC35F2Q8IXU6 374 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 RDH10Q8IZV5 341 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 SNX33Q8WV41 574 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 SLC7A6Q92536 515 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 ZFP3Q96NJ6 502 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 DERL3Q96Q80 235 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 ABHD1Q96SE0 405 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms