RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CECR9P0C854 216 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 DAOP14920 347 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 CRHR1P34998 444 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 CLK1P49759 484 aaKnown RBP11.46□□□□□ -0.57
USF1-206ENST00000491629 CHN2P52757 468 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 TUBA1BP68363 451 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 TUBA4AP68366 448 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 NAAAQ02083 359 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.57
USF1-206ENST00000491629 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 CCDC153Q494R4 210 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 FAM153CQ494X1 144 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 ANKRD16Q6P6B7 361 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 VHLLQ6RSH7 139 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 DEF8Q6ZN54 512 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 FRRS1Q6ZNA5 592 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 TUBA1AQ71U36 451 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 DDIASQ8IXT1 998 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 TMEM99Q8N816 258 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 ZNF540Q8NDQ6 660 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 CNOT9Q92600 299 aaKnown RBP11.46□□□□□ -0.57
USF1-206ENST00000491629 HPS1Q92902 700 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 MOAP1Q96BY2 351 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 DOK1Q99704 481 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 SAP130Q9H0E3 1048 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 OR51I1Q9H343 314 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 PARPBPQ9NWS1 579 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 CRNNQ9UBG3 495 aaPredicted RBP11.46□□□□□ -0.57
USF1-206ENST00000491629 OSGIN1Q9UJX0 560 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 VWFP04275 2813 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 TMED7-TICAM2A0A0A6YYA0 188 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 PDE5AO76074 875 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 LGI1O95970 557 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 WNT11O96014 354 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 IGLV1-44P01699 117 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 CELA3BP08861 270 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 OR12D1P0DN82 309 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 IDH2P48735 452 aaKnown RBP11.45□□□□□ -0.58
USF1-206ENST00000491629 P2RY4P51582 365 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 DVL1P1P54792 670 aaPredicted RBP11.45□□□□□ -0.58
USF1-206ENST00000491629 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 CCNIQ14094 377 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 C6orf136Q5SQH8 315 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 C1QTNF12Q5T7M4 302 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 IL23RQ5VWK5 629 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 TRMT10CQ7L0Y3 403 aaKnown RBP11.45□□□□□ -0.58
USF1-206ENST00000491629 CARM1Q86X55 608 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 ZNF786Q8N393 782 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 OR9K2Q8NGE7 335 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 OR1K1Q8NGR3 316 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 ZNF563Q8TA94 476 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 MIPOL1Q8TD10 442 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 BCL2L2Q92843 193 aaPredicted RBP11.45□□□□□ -0.58
USF1-206ENST00000491629 RAB8BQ92930 207 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 AURKBQ96GD4 344 aaPredicted RBP11.45□□□□□ -0.58
USF1-206ENST00000491629 DUSP26Q9BV47 211 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 KATNB1Q9BVA0 655 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 TMED7Q9Y3B3 224 aa11.45□□□□□ -0.58
USF1-206ENST00000491629 SPIN1Q9Y657 262 aaPredicted RBP11.45□□□□□ -0.58
USF1-206ENST00000491629 PRKDCP78527 4128 aaKnown RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 ZNF503-AS2A6NEH8 195 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 TMEM114B3SHH9 223 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 CFLARO15519 480 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 EIF1BO60739 113 aaKnown RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 SCN2BO60939 215 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 RGS9O75916 674 aaPredicted RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 AKR7A3O95154 331 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 AK1P00568 194 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 GUSBP08236 651 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 THBS4P35443 961 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 SOAT1P35610 550 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 RPL3P39023 403 aaKnown RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 SLC35A1P78382 337 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 KCNJ10P78508 379 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 OR4F3Q6IEY1 312 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 PAQR6Q6TCH4 344 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 C1orf229Q6ZS94 237 aaPredicted RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 AAED1Q7RTV5 226 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 SVOPLQ8N434 492 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 ZFAND2BQ8WV99 257 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 SLC35G5Q96KT7 338 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 MYCBPQ99417 103 aaPredicted RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 RAB1BQ9H0U4 201 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 METTL17Q9H7H0 456 aaPredicted RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 EXOSC3Q9NQT5 275 aaKnown RBP11.44□□□□□ -0.58
USF1-206ENST00000491629 ATAD3AQ9NVI7 634 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 SLC35A3Q9Y2D2 325 aa11.44□□□□□ -0.58
USF1-206ENST00000491629 A0A096LPE4 126 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 ARPC4-TTLL3A0A0A6YYG9 625 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 A0A1W2PPZ6 126 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 TMEM89A2RUT3 159 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 FAM157AC9JC47 383 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 hCG_2039718K7EN88 272 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 WNT9BO14905 357 aa11.43□□□□□ -0.58
USF1-206ENST00000491629 ZNF208O43345 1280 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms