RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CALCR	P30988	508 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	RYK	P34925	604 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	RPL3	P39023	403 aa	Known RBP	16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	GPR6	P46095	362 aa	Predicted RBP	16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SLC7A5	Q01650	507 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MIDN	Q504T8	468 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	BCL2L2	Q92843	193 aa	Predicted RBP	16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MRPL24	Q96A35	216 aa	Known RBP	16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	DDIT4L	Q96D03	193 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	PCDHGB4	Q9UN71	923 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SLC35A3	Q9Y2D2	325 aa		16.64	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	NUP214	P35658	2090 aa	Predicted RBP	16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	FCMR	O60667	390 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	UGT2B17	O75795	530 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	BCL10	O95999	233 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	PNP	P00491	289 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	IGLV1-44	P01699	117 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SAG	P10523	405 aa	Predicted RBP	16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	NEFH	P12036	1026 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ANPEP	P15144	967 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	HPCAL1	P37235	193 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	HTR3A	P46098	478 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	RPL38	P63173	70 aa	Known RBP	16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	POU3F1	Q03052	451 aa	Predicted RBP	16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	PAQR6	Q6TCH4	344 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	FRMD7	Q6ZUT3	714 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	NATD1	Q8N6N6	113 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ZIC4	Q8N9L1	334 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OR5D16	Q8NGK9	328 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SFXN5	Q8TD22	340 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MAGEE2	Q8TD90	523 aa	Predicted RBP	16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SF3B5	Q9BWJ5	86 aa	Known RBP	16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	PIF1	Q9H611	641 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	NARFL	Q9H6Q4	476 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MKLN1	Q9UL63	735 aa		16.63	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ZNF587B	E7ETH6	402 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	LGI1	O95970	557 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	GAA	P10253	952 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MYL2	P10916	166 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	LAMP1	P11279	417 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	PGM1	P36871	562 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TMEM33	P57088	247 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SLC9B1	Q4ZJI4	515 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	CLEC6A	Q6EIG7	209 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	CDK20	Q8IZL9	346 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OR7A2P	Q8NGA2	310 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OIT3	Q8WWZ8	545 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	RACGAP1	Q9H0H5	632 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TPK1	Q9H3S4	243 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MS4A5	Q9H3V2	200 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TNFRSF12A	Q9NP84	129 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ATAD3A	Q9NVI7	634 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TREM2	Q9NZC2	230 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	DCDC2	Q9UHG0	476 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	PTGDR2	Q9Y5Y4	395 aa		16.62	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	LOC105371242	A0A075B767	164 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334		A0A087WUV0	522 aa	Predicted RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OR6C65	A6NJZ3	312 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	NR5A2	O00482	541 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SCAMP2	O15127	329 aa	Known RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ZNF208	O43345	1280 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	C6orf47	O95873	294 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	IGKV3-15	P01624	115 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	IGFBP1	P08833	259 aa	Predicted RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	IMPDH2	P12268	514 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	BCKDHA	P12694	445 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MATN1	P21941	496 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MAP2K6	P52564	334 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	MYBPC1	Q00872	1141 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ARHGAP11B	Q3KRB8	267 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OTUD3	Q5T2D3	398 aa	Predicted RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	C1orf229	Q6ZS94	237 aa	Predicted RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	FAM71C	Q8NEG0	241 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	IL17RD	Q8NFM7	739 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OR9K2	Q8NGE7	335 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	OR2T11	Q8NH01	316 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	RDH5	Q92781	318 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ZNF385A	Q96PM9	386 aa	Known RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SLC52A3	Q9NQ40	469 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	DDX28	Q9NUL7	540 aa	Known RBP	16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	CMAHP	Q9Y471	501 aa		16.61	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334		A0A096LPE4	126 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TMED7-TICAM2	A0A0A6YYA0	188 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	CENPVL1	A0A0U1RR11	272 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334		A0A1W2PPZ6	126 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TMEM114	B3SHH9	223 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334		G3V2L1	256 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	CFLAR	O15519	480 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	SYNGR3	O43761	229 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	HKR1	P10072	659 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	CBR1	P16152	277 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ACHE	P22303	614 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	COL8A2	P25067	703 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	IDH2	P48735	452 aa	Known RBP	16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	EVX1	P49640	407 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TUBA1B	P68363	451 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	TUBA4A	P68366	448 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	GALNTL6	Q49A17	601 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	ELFN2	Q5R3F8	820 aa		16.6	■□□□□ 0.25
CDK5RAP2-218	ENST00000491334	REP15	Q6BDI9	236 aa		16.6	■□□□□ 0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms