RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 VPS33AQ96AX1 596 aa14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 TMEM19Q96HH6 336 aa14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 ARL5BQ96KC2 179 aa14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 EBF4Q9BQW3 602 aa14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 TMEM204Q9BSN7 226 aa14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 SF3B5Q9BWJ5 86 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 OR11A1Q9GZK7 315 aa14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 TEP1Q99973 2627 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 PRRC2AP48634 2157 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-217ENST00000491330 PRAMEF27A3QJZ7 478 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 PRORSD1PA6NEY8 169 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 OR5H1A6NKK0 313 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 AP3D1O14617 1153 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 MVDP53602 400 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 NCALDP61601 193 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 FAPQ12884 760 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 RGNQ15493 299 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 OTUD3Q5T2D3 398 aaPredicted RBP14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 C22orf34Q6ZV56 151 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 VRK2Q86Y07 508 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 POMGNT2Q8NAT1 580 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 BHLHE22Q8NFJ8 381 aaPredicted RBP14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 OR9I1Q8NGQ6 314 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 SMAP2Q8WU79 429 aaPredicted RBP14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 ZNF607Q96SK3 696 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 CCDC134Q9H6E4 229 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 DLL4Q9NR61 685 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 CCDC167Q9P0B6 97 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 ZNF443Q9Y2A4 671 aaPredicted RBP14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 PCDHB14Q9Y5E9 798 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 AKAP6Q13023 2319 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 DSPPQ9NZW4 1301 aa14.65□□□□□ -0.06
PDLIM2-217ENST00000491330 HIVEP1P15822 2718 aa14.65□□□□□ -0.07
PDLIM2-217ENST00000491330 TMEM72A0PK05 275 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 SERPINB7O75635 380 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 RAD51DO75771 328 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 AHSA1O95433 338 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 WNT11O96014 354 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 COX5AP20674 150 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 IGHV1-2P23083 117 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 PTAFRP25105 342 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 BSPH1Q075Z2 132 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 OR7A5Q15622 319 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF672Q499Z4 452 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 C5orf46Q6UWT4 87 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 AAED1Q7RTV5 226 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 GPAT4Q86UL3 456 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 CCDC103Q8IW40 242 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 DNAJA3Q96EY1 480 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 ADAM19Q9H013 955 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 PAIP1Q9H074 479 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 EVA1AQ9H8M9 152 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 BARX1Q9HBU1 254 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 MOV10Q9HCE1 1003 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 BCL2L10Q9HD36 194 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 A4GALTQ9NPC4 353 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 RLIMQ9NVW2 624 aa14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 LEF1Q9UJU2 399 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-217ENST00000491330 ELOA3DA6NLF2 546 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF716A6NP11 495 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 NR5A2O00482 541 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 OR2T1O43869 369 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 PGM3O95394 542 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 IGHV3-9P01782 118 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 GKN3PP0CG01 181 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ETS2P15036 469 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 PAX1P15863 534 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC6A2P23975 617 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 LOXP28300 417 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 CEACAM7Q14002 265 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ELOA3BQ3SY89 546 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 GCNT6Q5T4J0 391 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 AGAP6Q5VW22 663 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 REEP3Q6NUK4 255 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 SLC22A25Q6T423 547 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF836Q6ZNA1 936 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 FUNDC1Q8IVP5 155 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 C17orf78Q8N4C9 275 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF433Q8N7K0 673 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 C1orf162Q8NEQ5 155 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ELOA3Q8NG57 546 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 STK35Q8TDR2 534 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF524Q96C55 264 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 HS6ST2Q96MM7 605 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 KCNS3Q9BQ31 491 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 FKRPQ9H9S5 495 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ZNF701Q9NV72 531 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ADPRHL2Q9NX46 363 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 CISD1Q9NZ45 108 aaKnown RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 MALT1Q9UDY8 824 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 DCTN4Q9UJW0 460 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 ING1Q9UK53 422 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 RASD1Q9Y272 281 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 AMDHD2Q9Y303 409 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 MED13LQ71F56 2210 aa14.63□□□□□ -0.07
PDLIM2-217ENST00000491330 CSMD2Q7Z408 3487 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 H7C1Q1 480 aa14.62□□□□□ -0.07
PDLIM2-217ENST00000491330 BCAS1O75363 584 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms