RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RDH10Q8IZV5 341 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 OR51S1Q8NGJ8 323 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 OR52M1Q8NGK5 317 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 FGF11Q92914 225 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 PAGE5Q96GU1 130 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 ZNF414Q96IQ9 312 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 TSG101Q99816 390 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 REEP4Q9H6H4 257 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 SLC25A22Q9H936 323 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 DAZ3Q9NR90 486 aaKnown RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 STAP1Q9ULZ2 295 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 RPL36Q9Y3U8 105 aaKnown RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 NEUROG3Q9Y4Z2 214 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 COL16A1Q07092 1604 aaPredicted RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 MEGF6O75095 1541 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 PRRC2AP48634 2157 aaKnown RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 A6NIZ1 184 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 NPIPB7O75200 414 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 MTX2O75431 263 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 ATP5LO75964 103 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 P04436 131 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 NPR2P20594 1047 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 GLRA2P23416 452 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 CCNE1P24864 410 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 HMGB2P26583 209 aaKnown RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 CTRLP40313 264 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 GRIA1P42261 906 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 KPNA2P52292 529 aaKnown RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 PRPS1P60891 318 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 RAP1BP61224 184 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 TGFBR3Q03167 851 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 KLRB1Q12918 225 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 PDK3Q15120 406 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 SLC15A2Q16348 729 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 PARP15Q460N3 678 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 LRRC23Q53EV4 343 aaPredicted RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 SFT2D3Q587I9 215 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 PAGE3Q5JUK9 113 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 SAMD4BQ5PRF9 694 aaKnown RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 C1orf100Q5SVJ3 147 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 CASC10Q5T4H9 136 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 TIGD3Q6B0B8 471 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 OR52E8Q6IFG1 317 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 ZNF530Q6P9A1 599 aaPredicted RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 HSDL2Q6YN16 418 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 Q6ZPB1 254 aaPredicted RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 C6orf223Q8N319 242 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 SUMF2Q8NBJ7 301 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 OR10G3Q8NGC4 313 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 OR4K14Q8NGD5 310 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 FBXO30Q8TB52 745 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 FAM151AQ8WW52 585 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 UBE2E3Q969T4 207 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 RPUSD4Q96CM3 377 aaKnown RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 COQ2Q96H96 371 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 RNF2Q99496 336 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 NRTNQ99748 197 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 HES7Q9BYE0 225 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 RBKSQ9H477 322 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 GORASP2Q9H8Y8 452 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 MMP26Q9NRE1 261 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 SMPD3Q9NY59 655 aaPredicted RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 PTBP2Q9UKA9 531 aaKnown RBP2.62□□□□□ -1.99
CD46-216ENST00000490278 TRAF3IP3Q9Y228 551 aa2.62□□□□□ -1.99
CD46-216ENST00000490278 RPAP1Q9BWH6 1393 aaPredicted RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 TRAV26-1A0A087WT03 109 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 GPR89AB7ZAQ6 455 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 MBTPS2O43462 519 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 PRKAB2O43741 272 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 DIRAS1O95057 198 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 KLK3P07288 261 aaPredicted RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 GPR89BP0CG08 455 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 DBTP11182 482 aaKnown RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 POU2F1P14859 743 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 ZNF17P17021 662 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 MDKP21741 143 aaPredicted RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 CXCR2P25025 360 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 GNA11P29992 359 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 HNMTP50135 292 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 HLCSP50747 726 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 GBX2P52951 348 aaPredicted RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 TAS2R19P59542 299 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 TNFRSF17Q02223 184 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 FGL1Q08830 312 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 ZNF763Q0D2J5 394 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 GPM6BQ13491 265 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 MICBQ29980 383 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 BCL7AQ4VC05 210 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 CARD16Q5EG05 197 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 OR2G6Q5TZ20 316 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 OR4F3Q6IEY1 312 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 TMIGD1Q6UXZ0 262 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 PRSS41Q7RTY9 318 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 ZNF571Q7Z3V5 609 aaPredicted RBP2.61□□□□□ -1.99
CD46-216ENST00000490278 MKXQ8IYA7 352 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 PNKDQ8N490 385 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 ARL6IP6Q8N6S5 226 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 FAM133AQ8N9E0 248 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 MFSD9Q8NBP5 474 aa2.61□□□□□ -1.99
CD46-216ENST00000490278 MYDGFQ969H8 173 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms