RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KRT73Q86Y46 540 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 HSD17B8Q92506 261 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 USB1Q9BQ65 265 aaKnown RBP17.47■□□□□ 0.39
SMC4-222ENST00000490207 SPATA5L1Q9BVQ7 753 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 TMEM120AQ9BXJ8 343 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 TMEM38AQ9H6F2 299 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 SLC9A8Q9Y2E8 581 aa17.47■□□□□ 0.39
SMC4-222ENST00000490207 ZNF469Q96JG9 3925 aaPredicted RBP17.46■□□□□ 0.39
SMC4-222ENST00000490207 PRR14LQ5THK1 2151 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 LIPT2A6NK58 231 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 A8MVM7 634 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 TMEM229AB2RXF0 380 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 MRPL33O75394 65 aaKnown RBP17.46■□□□□ 0.39
SMC4-222ENST00000490207 IGHV3-9P01782 118 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 IGHV1-2P23083 117 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 HOXC5Q00444 222 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 CAPRIN1Q14444 709 aaKnown RBP17.46■□□□□ 0.39
SMC4-222ENST00000490207 STK11Q15831 433 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 RUNDC3AQ59EK9 446 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 OTUD3Q5T2D3 398 aaPredicted RBP17.46■□□□□ 0.39
SMC4-222ENST00000490207 FBXW9Q5XUX1 488 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 DHRS4L2Q6PKH6 230 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 CASP12Q6UXS9 341 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 ATG4DQ86TL0 474 aaPredicted RBP17.46■□□□□ 0.39
SMC4-222ENST00000490207 UBE2J2Q8N2K1 259 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 DPP10Q8N608 796 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 PIGTQ969N2 578 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 TMUB1Q9BVT8 246 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 TAPBPLQ9BX59 468 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 NGBQ9NPG2 151 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 ZNF446Q9NWS9 450 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 ANGPT4Q9Y264 503 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 FLVCR1Q9Y5Y0 555 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 DSCAMO60469 2012 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 VPS13CQ709C8 3753 aa17.46■□□□□ 0.39
SMC4-222ENST00000490207 AKR7A3O95154 331 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 PLAUP00749 431 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 TROVE2P10155 538 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMC4-222ENST00000490207 CD99P14209 185 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 SLC6A2P23975 617 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 ADSLP30566 484 aaPredicted RBP17.45■□□□□ 0.38
SMC4-222ENST00000490207 ADAM8P78325 824 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 FOXD4Q12950 439 aaPredicted RBP17.45■□□□□ 0.38
SMC4-222ENST00000490207 RETREG3Q86VR2 466 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 HIPK4Q8NE63 616 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 ZNF607Q96SK3 696 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 CGREF1Q99674 301 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 PIP5K1AQ99755 562 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 TMEM204Q9BSN7 226 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 RPS6KB2Q9UBS0 482 aa17.45■□□□□ 0.38
SMC4-222ENST00000490207 AQP7P3A6NL99 342 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 SMPD2O60906 423 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 AHSA1O95433 338 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 GGT1P19440 569 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 AQP1P29972 269 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 NTF4P34130 210 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 MTPNP58546 118 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 NFYCQ13952 458 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 SLC17A1Q14916 467 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 PPA1Q15181 289 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 CYP51A1Q16850 503 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 C1orf140Q5VVS0 124 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 METTL21CQ5VZV1 264 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 SEZ6L2Q6UXD5 910 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 COMTD1Q86VU5 262 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 ZNF433Q8N7K0 673 aaPredicted RBP17.44■□□□□ 0.38
SMC4-222ENST00000490207 TMEM99Q8N816 258 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 STK35Q8TDR2 534 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 TSPEARQ8WU66 669 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 ANKRD27Q96NW4 1050 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 ESRP2Q9H6T0 727 aaKnown RBP17.44■□□□□ 0.38
SMC4-222ENST00000490207 ADPRHL2Q9NX46 363 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 MALT1Q9UDY8 824 aa17.44■□□□□ 0.38
SMC4-222ENST00000490207 ELOA3DA6NLF2 546 aaPredicted RBP17.43■□□□□ 0.38
SMC4-222ENST00000490207 RAD51DO75771 328 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 NCALDP61601 193 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 SELPLGQ14242 412 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 ADRM1Q16186 407 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 ELOA3BQ3SY89 546 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 NCMAPQ5T1S8 102 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 WFDC11Q8NEX6 87 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 ELOA3Q8NG57 546 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 OR9K2Q8NGE7 335 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 TMEM45BQ96B21 275 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 SF3B5Q9BWJ5 86 aaKnown RBP17.43■□□□□ 0.38
SMC4-222ENST00000490207 RSPO3Q9BXY4 272 aaPredicted RBP17.43■□□□□ 0.38
SMC4-222ENST00000490207 C12orf10Q9HB07 376 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 FGFR1OP2Q9NVK5 253 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 PARPBPQ9NWS1 579 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 ASB6Q9NWX5 421 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 TAS2R16Q9NYV7 291 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 TESQ9UGI8 421 aaKnown RBP17.43■□□□□ 0.38
SMC4-222ENST00000490207 RNF115Q9Y4L5 304 aa17.43■□□□□ 0.38
SMC4-222ENST00000490207 CIB4A0PJX0 185 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 PRORSD1PA6NEY8 169 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 HS3ST1O14792 307 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 CLOCKO15516 846 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 TPST1O60507 370 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 NPIPB7O75200 414 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 SERPINB7O75635 380 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms