RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PIF1Q9H611 641 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 ESRP2Q9H6T0 727 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 THUMPD1Q9NXG2 353 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 MALT1Q9UDY8 824 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 TMED7Q9Y3B3 224 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 RNF115Q9Y4L5 304 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 ALPK2Q86TB3 2170 aa8.58□□□□□ -1.04
TMEM39A-210ENST00000490099 JMJD1CQ15652 2540 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HIVEP2P31629 2446 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 A0A0G2JPF8 293 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM72A0PK05 275 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 ZC3H12DA2A288 527 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HNRNPCL2B2RXH8 293 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HNRNPCL3B7ZW38 293 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 UBDO15205 165 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HNRNPCL1O60812 293 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 DIAPH2O60879 1101 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HEXAP06865 529 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HNRNPCL4P0DMR1 293 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 TFPIP10646 304 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 IL7RP16871 459 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 IDH3AP50213 366 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 P2RY4P51582 365 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 POLR2JP52435 117 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC35A1P78382 337 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 HPCAP84074 193 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 GTDC1Q4AE62 458 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 LRIF1Q5T3J3 769 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 PAQR6Q6TCH4 344 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 DNM1P46Q6ZS02 220 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 ATG4DQ86TL0 474 aaPredicted RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 PEX5LQ8IYB4 626 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF100Q8IYN0 542 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 MIER2Q8N344 545 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 CLIP4Q8N3C7 705 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 OR52P1PQ8NH57 321 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 PNPT1Q8TCS8 783 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 LRRC8CQ8TDW0 803 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 WDR60Q8WVS4 1066 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 STON2Q8WXE9 905 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 ZHX1-C8orf76Q96EF9 292 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 MAGEB18Q96M61 343 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 Q96MF0 132 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 SF3B5Q9BWJ5 86 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 CCDC134Q9H6E4 229 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 RMND5AQ9H871 391 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 A4GALTQ9NPC4 353 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC25A37Q9NYZ2 338 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 NPAP1Q9NZP6 1156 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 P2RX2Q9UBL9 471 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 NOSIPQ9Y314 301 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 PCDHB14Q9Y5E9 798 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 USH1CQ9Y6N9 552 aa8.57□□□□□ -1.04
TMEM39A-210ENST00000490099 A0A096LPI6 279 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 TRBV5-3A0A0A0MS03 114 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 LIPT2A6NK58 231 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 FAM171A2A8MVW0 826 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 SHISA9B4DS77 424 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 H7C1Q1 480 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CLIC1O00299 241 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 LYZL6O75951 148 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 LY6G6DO95868 133 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CD8AP01732 235 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CD3EP07766 207 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 SOD3P08294 240 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 PRG2P13727 222 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 GGT1P19440 569 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CRISP3P54108 245 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 DSTNP60981 165 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 LTBQ06643 244 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 BSPH1Q075Z2 132 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 FADDQ13158 208 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 RGNQ15493 299 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 GABRA6Q16445 453 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 PGGHGQ32M88 737 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF672Q499Z4 452 aaPredicted RBP8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 LIN52Q52LA3 116 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 NXNQ6DKJ4 435 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 WBP2NLQ6ICG8 309 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF836Q6ZNA1 936 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 DTX2Q86UW9 622 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 VRK2Q86Y07 508 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 MSRB3Q8IXL7 192 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 WDR31Q8NA23 367 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 SMAP2Q8WU79 429 aaPredicted RBP8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM171Q8WVE6 324 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CKAP2Q8WWK9 683 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM45BQ96B21 275 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 APH1AQ96BI3 265 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 PERPQ96FX8 193 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 AURKBQ96GD4 344 aaPredicted RBP8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 RADILQ96JH8 1075 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CCDC28BQ9BUN5 200 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 SPATA9Q9BWV2 254 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 CXorf56Q9H5V9 222 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 SLCO1B3Q9NPD5 702 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 PARPBPQ9NWS1 579 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms