RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TRAPPC13A5PLN9 417 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 LIPT2A6NK58 231 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 M0R3H8 397 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 GPR171O14626 319 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 TPST2O60704 377 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 AHSA1O95433 338 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 AGTR1P30556 359 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 CPOXP36551 454 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 SLC16A1P53985 500 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 HOXC5Q00444 222 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 BNIP2Q12982 314 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 MFSD13AQ14CX5 517 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 NPTX1Q15818 432 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 FAM69AQ5T7M9 428 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 C1orf140Q5VVS0 124 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 PPP4R4Q6NUP7 873 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 CBLL1Q75N03 491 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 CARM1Q86X55 608 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 KIF18BQ86Y91 864 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 DEFB107AQ8IZN7 70 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 MFSD8Q8NHS3 518 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 ABHD3Q8WU67 409 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 GEMIN6Q8WXD5 167 aaKnown RBP9.89□□□□□ -0.83
CPSF7-212ENST00000489728 POP5Q969H6 163 aaKnown RBP9.89□□□□□ -0.83
CPSF7-212ENST00000489728 STARD4Q96DR4 205 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 EPYCQ99645 322 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 NAA11Q9BSU3 229 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-212ENST00000489728 TAPBPLQ9BX59 468 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 SLC19A3Q9BZV2 496 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 OR11A1Q9GZK7 315 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 MUC13Q9H3R2 512 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 GORASP2Q9H8Y8 452 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 FANCFQ9NPI8 374 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 CD300AQ9UGN4 299 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 PRPF19Q9UMS4 504 aaKnown RBP9.89□□□□□ -0.83
CPSF7-212ENST00000489728 SAMD4AQ9UPU9 718 aaKnown RBP9.89□□□□□ -0.83
CPSF7-212ENST00000489728 SH3GLB1Q9Y371 365 aa9.89□□□□□ -0.83
CPSF7-212ENST00000489728 INTS1Q8N201 2190 aaKnown RBP9.89□□□□□ -0.83
CPSF7-212ENST00000489728 HECTD1Q9ULT8 2610 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 TRAV36DV7A0A075B6V5 113 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ZC3H12DA2A288 527 aaKnown RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 HTR3EA5X5Y0 456 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 NKX2-6A6NCS4 301 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 A8MXE2 369 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 B2RBV5 119 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 EEF1E1-BLOC1S5C9J1V9 151 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 EEF1E1O43324 174 aaKnown RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 HNRNPRO43390 633 aaKnown RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 VAMP5O95183 116 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 OR5F1O95221 314 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 CGAP01215 116 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 IGF2P01344 180 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 YES1P07947 543 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 IMPDH2P12268 514 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 IFNA8P32881 189 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 OR2B6P58173 313 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 SLC25A3Q00325 362 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 RASGEF1BQ0VAM2 473 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ENTPD8Q5MY95 495 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 TMEM201Q5SNT2 666 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 PLXDC2Q6UX71 529 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 LINC00114Q6XXX2 140 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 STK32CQ86UX6 486 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 CNEP1R1Q8N9A8 125 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 RBM15BQ8NDT2 890 aaKnown RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ADPRHL1Q8NDY3 354 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 VANGL1Q8TAA9 524 aaPredicted RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ADAMTS16Q8TE57 1224 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ROBO4Q8WZ75 1007 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 FAM162AQ96A26 154 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 CDRT15Q96T59 188 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 PSD2Q9BQI7 771 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ZNF426Q9BUY5 554 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 SF3B5Q9BWJ5 86 aaKnown RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 UCK2Q9BZX2 261 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
CPSF7-212ENST00000489728 ELOVL5Q9NYP7 299 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 PROCRQ9UNN8 238 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 SNX13Q9Y5W8 968 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 HCFC1P51610 2035 aa9.88□□□□□ -0.83
CPSF7-212ENST00000489728 IGKV1D-42A0A075B6H8 117 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 AQP7P3A6NL99 342 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 FTCDNL1E5RQL4 147 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 CNOT4O95628 575 aaKnown RBP9.87□□□□□ -0.83
CPSF7-212ENST00000489728 MT-ATP6P00846 226 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 SERPINA1P01009 418 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 IFNW1P05000 195 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 T-ENOLP0DO92 83 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 COX6B1P14854 86 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 CCNA2P20248 432 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 FPR1P21462 350 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 GRNP28799 593 aaKnown RBP9.87□□□□□ -0.83
CPSF7-212ENST00000489728 RBM34P42696 430 aaKnown RBP9.87□□□□□ -0.83
CPSF7-212ENST00000489728 CDH12P55289 794 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 EGR4Q05215 589 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 POU4F3Q15319 338 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 DNAL1Q4LDG9 190 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 IFI44LQ53G44 452 aa9.87□□□□□ -0.83
CPSF7-212ENST00000489728 MTX3Q5HYI7 312 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms