RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SLC27A4Q6P1M0 643 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SMARCD3Q6STE5 483 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 CCDC81Q6ZN84 652 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 OAFQ86UD1 273 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 OR13C2Q8NGS9 318 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SLC25A43Q8WUT9 341 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 TAAR8Q969N4 342 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 GNRHR2Q96P88 292 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SMAD5Q99717 465 aaKnown RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 NPAS1Q99742 590 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 YTHDF1Q9BYJ9 559 aaKnown RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 POTEKPQ9BYX7 375 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 OR2B2Q9GZK3 357 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 EGLN3Q9H6Z9 239 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SERINC1Q9NRX5 453 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 CACNA1AO00555 2505 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 ZC3H12DA2A288 527 aaKnown RBP12.79□□□□□ -0.36
VPS26A-205ENST00000489656 OR2T1O43869 369 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 EFNA2O43921 213 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 MPZL2O60487 215 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 AHSA1O95433 338 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 CH25HO95992 272 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 ASAH2BP0C7U1 165 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 HK1P19367 917 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 TNFSF10P50591 281 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 ARG2P78540 354 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 MYBPC1Q00872 1141 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 LTBQ06643 244 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 CD47Q08722 323 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 GINS1Q14691 196 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 MAD2L1BPQ15013 274 aaPredicted RBP12.79□□□□□ -0.36
VPS26A-205ENST00000489656 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 C3orf33Q6P1S2 294 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 POMZP3Q6PJE2 187 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 ENTHD1Q8IYW4 607 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 TMEM178AQ8NBL3 297 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 TRUB1Q8WWH5 349 aaKnown RBP12.79□□□□□ -0.36
VPS26A-205ENST00000489656 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 SAMD8Q96LT4 415 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 JSRP1Q96MG2 331 aaPredicted RBP12.79□□□□□ -0.36
VPS26A-205ENST00000489656 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 TSSK6Q9BXA6 273 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 PRRG3Q9BZD7 231 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 MCCC2Q9HCC0 563 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 NANSQ9NR45 359 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
VPS26A-205ENST00000489656 PCDHGA9Q9Y5G4 932 aaKnown RBP12.79□□□□□ -0.36
VPS26A-205ENST00000489656 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 CELSR3Q9NYQ7 3312 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 MAGEA13PA6NCF6 341 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 FTCDNL1E5RQL4 147 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 KLRC4-KLRK1H3BQV0 150 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 RRP8O43159 456 aaKnown RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 GLSO94925 669 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 NDUFB2O95178 105 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 TNFAIP8O95379 198 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 BMP7P18075 431 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 GABRB1P18505 474 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 CCNA2P20248 432 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 GRK5P34947 590 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 RPS5P46782 204 aaKnown RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 PRPS1P60891 318 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 GPR85P60893 370 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 CXCR4P61073 352 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 SNRPGP62308 76 aaKnown RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 EFNB1P98172 346 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 IL5RAQ01344 420 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 CDK5R2Q13319 367 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 MFSD13AQ14CX5 517 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 CTU2Q2VPK5 515 aaKnown RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 TMEM236Q5W0B7 351 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 ACSM5Q6NUN0 579 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 IGFL3Q6UXB1 125 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 CASP12Q6UXS9 341 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 LSRQ86X29 649 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 LNX2Q8N448 690 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 OR2T33Q8NG76 320 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 RHOXF1Q8NHV9 184 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF566Q969W8 418 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 TNFRSF13CQ96RJ3 184 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 GPX7Q96SL4 187 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 PIGQQ9BRB3 760 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 TEX12Q9BXU0 123 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 POLDIP3Q9BY77 421 aaKnown RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 HES7Q9BYE0 225 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF703Q9H7S9 590 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF696Q9H7X3 374 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms