RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ZNF552Q9H707 407 aaPredicted RBP19.59■□□□□ 0.73
SMC4-221ENST00000489573 FKRPQ9H9S5 495 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 DEPPQ9NTK1 212 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 DKKL1Q9UK85 242 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 BLOC1S6Q9UL45 172 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 OR5H15A6NDH6 313 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 AHSA1O95433 338 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 BGLAPP02818 100 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 CCDC159P0C7I6 412 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 HK1P19367 917 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 TCEA1P23193 301 aaKnown RBP19.58■□□□□ 0.73
SMC4-221ENST00000489573 ADH6P28332 368 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 SLC6A6P31641 620 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 PCYT1AP49585 367 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 GPR85P60893 370 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 SNRPGP62308 76 aaKnown RBP19.58■□□□□ 0.73
SMC4-221ENST00000489573 RPS4XP62701 263 aaKnown RBP19.58■□□□□ 0.73
SMC4-221ENST00000489573 LTBQ06643 244 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 THSD4Q6ZMP0 1018 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 CCDC103Q8IW40 242 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 OR8J1Q8NGP2 316 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 PTDSS2Q9BVG9 487 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 SERINC1Q9NRX5 453 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 ZNF229Q9UJW7 825 aa19.58■□□□□ 0.73
SMC4-221ENST00000489573 TRIM64A6NGJ6 449 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 LRRC3CA6NJW4 275 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 EFSO43281 561 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 NDUFB2O95178 105 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 MT-ATP6P00846 226 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 ASAH2BP0C7U1 165 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 SMIM18P0DKX4 95 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 CRHBPP24387 322 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 CCL11P51671 97 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 SNAPC1Q16533 368 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 FAM69AQ5T7M9 428 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 C1QL3Q5VWW1 255 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 TCEANCQ8N8B7 351 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 BPIFB6Q8NFQ5 453 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 DDIT4LQ96D03 193 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 IL4I1Q96RQ9 567 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 FAM173AQ9BQD7 235 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 IFT27Q9BW83 186 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 OR11A1Q9GZK7 315 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 ENKD1Q9H0I2 346 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 TUBA8Q9NY65 449 aaPredicted RBP19.57■□□□□ 0.72
SMC4-221ENST00000489573 SPIN1Q9Y657 262 aaPredicted RBP19.57■□□□□ 0.72
SMC4-221ENST00000489573 EML6Q6ZMW3 1958 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 BHLHE40O14503 412 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 PRKYO43930 277 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 HMGN1P05114 100 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 GRK5P34947 590 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 BLMHQ13867 455 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.57■□□□□ 0.722e-41■■■■■ 207.1
SMC4-221ENST00000489573 ANKDD1AQ495B1 522 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 GTPBP8Q8N3Z3 284 aaPredicted RBP19.57■□□□□ 0.72
SMC4-221ENST00000489573 MDS2Q8NDY4 140 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 TSPAN14Q8NG11 270 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 OR6S1Q8NH40 331 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 CLN6Q9NWW5 311 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 BOKQ9UMX3 212 aaPredicted RBP19.57■□□□□ 0.72
SMC4-221ENST00000489573 BAIAP2Q9UQB8 552 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 HIF3AQ9Y2N7 669 aa19.57■□□□□ 0.72
SMC4-221ENST00000489573 OR2T1O43869 369 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 SRD5A2P31213 254 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 GABARAPL2P60520 117 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 PRPS1P60891 318 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 CSNK2BP67870 215 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 SELENBP1Q13228 472 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 SMN1Q16637 294 aaKnown RBP19.56■□□□□ 0.72
SMC4-221ENST00000489573 C3orf33Q6P1S2 294 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 MAMDC2Q7Z304 686 aaPredicted RBP19.56■□□□□ 0.72
SMC4-221ENST00000489573 NANOGNBQ7Z5D8 188 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 LNX2Q8N448 690 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 ZFP64Q9NPA5 681 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 SCN3BQ9NY72 215 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 MED13Q9UHV7 2174 aa19.56■□□□□ 0.72
SMC4-221ENST00000489573 PINLYPA6NC86 204 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 SURF4O15260 269 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 XPNPEP2O43895 674 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 EFNA2O43921 213 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 FAM20BO75063 409 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 HIST1H2ABP04908 130 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 IL11P20809 199 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 CDH15P55291 814 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 ARG2P78540 354 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 FOXK1P85037 733 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 EFNB1P98172 346 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 APOFQ13790 326 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 TMEM201Q5SNT2 666 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 HIST3H2AQ7L7L0 130 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 FAM26EQ8N5C1 309 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 ATP6V1C2Q8NEY4 427 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 FDCSPQ8NFU4 85 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 OR2M7Q8NG81 312 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 OR5M1Q8NGP8 315 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 TMEM163Q8TC26 289 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 SLC25A43Q8WUT9 341 aaPredicted RBP19.55■□□□□ 0.72
SMC4-221ENST00000489573 HIST1H2ACQ93077 130 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 DTNBP1Q96EV8 351 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 PLEKHA8Q96JA3 519 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms