RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 Q6ZTK2 550 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 FUNDC1Q8IVP5 155 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 RNF148Q8N7C7 305 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 L3MBTL4Q8NA19 623 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ICA1LQ8NDH6 482 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 OR2T11Q8NH01 316 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ZG16BQ96DA0 208 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 CMTM7Q96FZ5 175 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 SH3GL1Q99961 368 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 KCTD14Q9BQ13 255 aaPredicted RBP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ECSITQ9BQ95 431 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 RHBGQ9H310 441 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 PLK3Q9H4B4 646 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 C16orf95Q9H693 158 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF665Q9H7R5 613 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 RMND5AQ9H871 391 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 TNFRSF19Q9NS68 423 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ASIC5Q9NY37 505 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 GPRC5BQ9NZH0 403 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 TMEM181Q9P2C4 612 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 COPS7AQ9UBW8 275 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 PRODH2Q9UF12 536 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 EXO1Q9UQ84 846 aaKnown RBP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 TMED5Q9Y3A6 229 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 RNF11Q9Y3C5 154 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 DTNAQ9Y4J8 743 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 AP4S1Q9Y587 144 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 SPACA6W5XKT8 324 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 DNAH2Q9P225 4427 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 SYNDIG1LA6NDD5 238 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF839A8K0R7 811 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 C17orf105B2RV13 164 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 B9A039 149 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ACOT8O14734 319 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CASQ2O14958 399 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 OIP5O43482 229 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 NTN1O95631 604 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PDYNP01213 254 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 IFNA16P05015 189 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ERCC1P07992 297 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 G6PDP11413 515 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 HSD3B1P14060 373 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PSMA4P25789 261 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 HSD3B2P26439 372 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 AGTR1P30556 359 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 SRD5A2P31213 254 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 RPL4P36578 427 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 SERPINF1P36955 418 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 HTR6P50406 440 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF83P51522 516 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 HNRNPFP52597 415 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 B3GALT5-AS1P59052 145 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 MRPS35P82673 323 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC13A2Q13183 592 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CHIT1Q13231 466 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 NAE1Q13564 534 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 HIST2H2ACQ16777 129 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 DPY19L1Q2PZI1 675 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 FRG2Q64ET8 278 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 HIST2H2AA3Q6FI13 130 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CAPN13Q6MZZ7 669 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 C8orf82Q6P1X6 216 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 AGTRAPQ6RW13 159 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 KLHL17Q6TDP4 642 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF620Q6ZNG0 422 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 JAZF1Q86VZ6 243 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 THOC6Q86W42 341 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CA13Q8N1Q1 262 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 DPP10Q8N608 796 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 METTL25Q8N6Q8 603 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 WDSUB1Q8N9V3 476 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 TMEM52Q8NDY8 209 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 DEFB108BQ8NET1 73 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 NRG4Q8WWG1 115 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CFHR4Q92496 578 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 VPS33AQ96AX1 596 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PPWD1Q96BP3 646 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PYCR2Q96C36 320 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 METTL2AQ96IZ6 378 aaKnown RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF570Q96NI8 536 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 FRG2BQ96QU4 278 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 NR1H4Q96RI1 486 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 MMP28Q9H239 520 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CNTD2Q9H8S5 307 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 MARCH7Q9H992 704 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 FKRPQ9H9S5 495 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PRTFDC1Q9NRG1 225 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 SIRT3Q9NTG7 399 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ACTR3BQ9P1U1 418 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 ABCD2Q9UBJ2 740 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 CD300AQ9UGN4 299 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC22A14Q9Y267 594 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 DYRK1BQ9Y463 629 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PCDHGA11Q9Y5H2 935 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 SNX13Q9Y5W8 968 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 KCNE2Q9Y6J6 123 aa6.4□□□□□ -1.38
EXOSC3-206ENST00000489414 PCNX3Q9H6A9 2034 aa6.4□□□□□ -1.39
EXOSC3-206ENST00000489414 SERTM1A2A2V5 107 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms