RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 OR10H1Q9Y4A9 318 aa7.76□□□□□ -1.17
VTI1A-207ENST00000489357 PCDHGB6Q9Y5F9 930 aa7.76□□□□□ -1.17
VTI1A-207ENST00000489357 SPIN1Q9Y657 262 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-207ENST00000489357 SPEGQ15772 3267 aa7.76□□□□□ -1.17
VTI1A-207ENST00000489357 NUP210LQ5VU65 1888 aa7.76□□□□□ -1.17
VTI1A-207ENST00000489357 SCN3AQ9NY46 2000 aa7.76□□□□□ -1.17
VTI1A-207ENST00000489357 SEC16AO15027 2179 aa7.76□□□□□ -1.17
VTI1A-207ENST00000489357 IGHV1OR21-1A0A087WYE8 117 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 IGHV5-51A0A0C4DH38 117 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CENPVL1A0A0U1RR11 272 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 A0A1W2PQD3 144 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 IMPA2O14732 288 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 TO15178 435 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 NDUFB2O95178 105 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 IL33O95760 270 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CSTAP01040 98 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CD1AP06126 327 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ANKRD34CP0C6C1 535 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 FTH1P19P0C7X4 201 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 GKN3PP0CG01 181 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 SPINK2P20155 84 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 MAKP20794 623 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 SSTR4P31391 388 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ATP6V1E1P36543 226 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ARL4DP49703 201 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DUSP3P51452 185 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 FXYD6P3P58550 94 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ACTA2P62736 377 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ACTG2P63267 376 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 HSF2Q03933 536 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 LGALS3BPQ08380 585 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 GALEQ14376 348 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 GGTLC2Q14390 218 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DEFB133Q30KQ1 61 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 SLC35D3Q5M8T2 416 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CLEC12AQ5QGZ9 265 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DDI2Q5TDH0 399 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 FNDC7Q5VTL7 733 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 AGAP7PQ5VUJ5 663 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 LIPKQ5VXJ0 399 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CDCP2Q5VXM1 449 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 WBP2NLQ6ICG8 309 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ZNF322Q6U7Q0 402 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 WDR88Q6ZMY6 472 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DPY19L2P2Q6ZN68 376 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 HMGN2P46Q86SG4 172 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ZNF761Q86XN6 746 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CPOQ8IVL8 374 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 SFTPA2Q8IWL1 248 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DMRTC2Q8IXT2 367 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 PARP16Q8N5Y8 322 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 BCORP1Q8N888 145 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 OR14A16Q8NHC5 309 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 ACOT12Q8WYK0 555 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CNOT9Q92600 299 aaKnown RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DAZLQ92904 295 aaKnown RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 TGM7Q96PF1 710 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 NDC1Q9BTX1 674 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 IFT27Q9BW83 186 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 DPH1Q9BZG8 443 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 TGIF2Q9GZN2 237 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 SMURF1Q9HCE7 757 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 EXOSC4Q9NPD3 245 aaKnown RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 MEPEQ9NQ76 525 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 HINT3Q9NQE9 182 aaKnown RBP7.75□□□□□ -1.17
VTI1A-207ENST00000489357 LANCL2Q9NS86 450 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 STARD5Q9NSY2 213 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 FBXO34Q9NWN3 711 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 IRAK4Q9NWZ3 460 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 FLRT3Q9NZU0 649 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 GPR52Q9Y2T5 361 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 SLC6A5Q9Y345 797 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 NOX1Q9Y5S8 564 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 CHD8Q9HCK8 2581 aa7.75□□□□□ -1.17
VTI1A-207ENST00000489357 AKAP13Q12802 2813 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 A0A1B0GX78 115 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 TCRBV16S1A1N1A0A5B0 115 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 ANKRD61A6NGH8 418 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 NTN3O00634 580 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-207ENST00000489357 SCDO00767 359 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 PLPP2O43688 288 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 PIP5K1CO60331 668 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 IGKV1D-16P01601 117 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 APOA1P02647 267 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 MT-ND5P03915 603 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 IGKV3-11P04433 115 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 IFNA16P05015 189 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 MYF5P13349 255 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 HPGDP15428 266 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 SLC2A5P22732 501 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 RPS19P39019 145 aaKnown RBP7.74□□□□□ -1.17
VTI1A-207ENST00000489357 SLC37A1P57057 533 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 RPS4XP62701 263 aaKnown RBP7.74□□□□□ -1.17
VTI1A-207ENST00000489357 HOXC5Q00444 222 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 E2F1Q01094 437 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 FOXD4Q12950 439 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-207ENST00000489357 MRPL28Q13084 256 aaKnown RBP7.74□□□□□ -1.17
VTI1A-207ENST00000489357 EMC4Q5J8M3 183 aa7.74□□□□□ -1.17
VTI1A-207ENST00000489357 PLBD1Q6P4A8 553 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms