RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 MCUR1Q96AQ8 359 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 SDCCAG3Q96C92 435 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 PYURFQ96I23 114 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 GMPPAQ96IJ6 420 aaPredicted RBP11.15□□□□□ -0.62
COL4A5-206ENST00000489230 ZNF845Q96IR2 970 aaPredicted RBP11.15□□□□□ -0.62
COL4A5-206ENST00000489230 HS6ST2Q96MM7 605 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 TMEM43Q9BTV4 400 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 SFXN3Q9BWM7 321 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 SLC19A3Q9BZV2 496 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 RNF122Q9H9V4 155 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 KCNJ16Q9NPI9 418 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 Q9UFV3 132 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 RNF6Q9Y252 685 aa11.15□□□□□ -0.62
COL4A5-206ENST00000489230 CHP2O43745 196 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 TPST2O60704 377 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 TOXO94900 526 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 AHSA1O95433 338 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 CLDN14O95500 239 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 TGM6O95932 706 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 OR1E2P47887 323 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 CDH12P55289 794 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 CTBP2P56545 445 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 OR2B6P58173 313 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 PDK3Q15120 406 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 C1orf140Q5VVS0 124 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 PPP4R4Q6NUP7 873 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 TTC33Q6PID6 262 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-206ENST00000489230 LINC00114Q6XXX2 140 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 CCDC121Q6ZUS5 278 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 SEM1Q6ZVN7 128 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 FCRLAQ7L513 359 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 COMTD1Q86VU5 262 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 FAM156AQ8NDB6 213 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 MFSD8Q8NHS3 518 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 ITLN2Q8WWU7 325 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-206ENST00000489230 ASB9Q96DX5 294 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 SLC41A3Q96GZ6 507 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 HSH2DQ96JZ2 352 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 LRGUKQ96M69 825 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 TRIM15Q9C019 465 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 PIGMQ9H3S5 423 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 KLHL9Q9P2J3 617 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 GMPR2Q9P2T1 348 aaKnown RBP11.14□□□□□ -0.63
COL4A5-206ENST00000489230 RIMS3Q9UJD0 308 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 PACSIN3Q9UKS6 424 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 EMC9Q9Y3B6 208 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-206ENST00000489230 HEATR5AQ86XA9 2040 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 MYO7BQ6PIF6 2116 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 ABCA12Q86UK0 2595 aa11.14□□□□□ -0.63
COL4A5-206ENST00000489230 CELSR2Q9HCU4 2923 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 TRAV36DV7A0A075B6V5 113 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 A0A1W2PNR3 127 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 CPSF4LA6NMK7 179 aaKnown RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 TMEM229AB2RXF0 380 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 GPR171O14626 319 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 ARPC2O15144 300 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 GSC2O15499 205 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 HNRNPRO43390 633 aaKnown RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 NPIPB7O75200 414 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 VAMP5O95183 116 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 SHC1P29353 583 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 MSX2P35548 267 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 RBM34P42696 430 aaKnown RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 SMIM11AP58511 58 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 NPTX1Q15818 432 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 ZNF239Q16600 458 aaKnown RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 TMEM201Q5SNT2 666 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 CRYBG3Q68DQ2 2970 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 DEF8Q6ZN54 512 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 VTCN1Q7Z7D3 282 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 RBM45Q8IUH3 476 aaKnown RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 CCDC71Q8IV32 467 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 PIGXQ8TBF5 258 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 INTS12Q96CB8 462 aaKnown RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 SLC7A6OSQ96CW6 309 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-206ENST00000489230 ARL5BQ96KC2 179 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 WFDC6Q9BQY6 131 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 KLHL4Q9C0H6 718 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 OR11A1Q9GZK7 315 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 COQ10BQ9H8M1 238 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 CHST11Q9NPF2 352 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 FANCFQ9NPI8 374 aa11.13□□□□□ -0.63
COL4A5-206ENST00000489230 LIPT2A6NK58 231 aa11.12□□□□□ -0.63
COL4A5-206ENST00000489230 CYTIPO60759 359 aa11.12□□□□□ -0.63
COL4A5-206ENST00000489230 IGF2P01344 180 aa11.12□□□□□ -0.63
COL4A5-206ENST00000489230 YES1P07947 543 aa11.12□□□□□ -0.63
COL4A5-206ENST00000489230 RHCEP18577 417 aa11.12□□□□□ -0.63
COL4A5-206ENST00000489230 FPR1P21462 350 aa11.12□□□□□ -0.63
COL4A5-206ENST00000489230 GTF2E2P29084 291 aaKnown RBP11.12□□□□□ -0.63
COL4A5-206ENST00000489230 PEX19P40855 299 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms