RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 LRP5LA4QPB2 252 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 F5H6K3 240 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 GOLGA8SH3BPF8 625 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 SGK1O00141 431 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 TAPBPO15533 448 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 EFNA2O43921 213 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 ECI2O75521 394 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 WBP4O75554 376 aaKnown RBP2.21□□□□□ -2.06
RFC4-213ENST00000489028 CA1P00915 261 aaPredicted RBP2.21□□□□□ -2.06
RFC4-213ENST00000489028 SERPINA3P01011 423 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 MX1P20591 662 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 MMP11P24347 488 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 CTRLP40313 264 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 P2RY1P47900 373 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 PPOXP50336 477 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 EFNB2P52799 333 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 CDH4P55283 916 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 KLRC3Q07444 240 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 LAGE3Q14657 143 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 MPPED2Q15777 294 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 DPYSL2Q16555 572 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 SFT2D3Q587I9 215 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 EOGTQ5NDL2 527 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 UTS2BQ765I0 119 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 TPRA1Q86W33 373 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 ZNF100Q8IYN0 542 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 C20orf203Q8NBC4 194 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 MRPS31Q92665 395 aaKnown RBP2.21□□□□□ -2.06
RFC4-213ENST00000489028 RDH5Q92781 318 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 EFHD2Q96C19 240 aaPredicted RBP2.21□□□□□ -2.06
RFC4-213ENST00000489028 TBX15Q96SF7 602 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 NPY6RQ99463 290 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 COPS8Q99627 209 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 SLC35A5Q9BS91 424 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 NIPSNAP3BQ9BS92 247 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 RNF126Q9BV68 326 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 GON7Q9BXV9 100 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 CHIAQ9BZP6 476 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 ZNF385DQ9H6B1 395 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 SMYD3Q9H7B4 428 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 MCCC2Q9HCC0 563 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 ETNK2Q9NVF9 386 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 SUN2Q9UH99 717 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 ADAM28Q9UKQ2 775 aa2.21□□□□□ -2.06
RFC4-213ENST00000489028 NAP1L2Q9ULW6 460 aaPredicted RBP2.21□□□□□ -2.06
RFC4-213ENST00000489028 IGHV2-70DA0A0C4DH43 119 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 OR52A4PA6NMU1 304 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 SNTNA6NMZ2 147 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 ZNF705EA8MWA4 302 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 E7ESA3 106 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 H3BMQ9 156 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 K7N7A8 449 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 RS1O15537 224 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 ZNF264O43296 627 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 TIMM8AO60220 97 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 CLDN9O95484 217 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 TSPAN12O95859 305 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 NDUFB10O96000 172 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 ALOX5P09917 674 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 TOP1P11387 765 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 RNH1P13489 461 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 CD1BP29016 333 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 AQP1P29972 269 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 NMT1P30419 496 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 CD80P33681 288 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 MAGEA8P43361 318 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 CASP4P49662 377 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 SUCLG1P53597 346 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 NUP107P57740 925 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 LINC00315P59091 139 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 LRRC63Q05C16 580 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 ST3GAL3Q11203 375 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 IDI1Q13907 227 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 SLC25A52Q3SY17 297 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 TP53I3Q53FA7 332 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 CTSL3PQ5NE16 218 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 PRAMEF5Q5TYX0 476 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 PRAMEF6Q5VXH4 476 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 OR4F3Q6IEY1 312 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 SLC22A9Q8IVM8 553 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 SLC35F2Q8IXU6 374 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 LINC01561Q8N1V8 128 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 MFSD9Q8NBP5 474 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 FAM83FQ8NEG4 500 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 OR51G2Q8NGK0 314 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 OR52K2Q8NGK3 314 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 OR5L2Q8NGL0 311 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 SCFD1Q8WVM8 642 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 TCTEX1D2Q8WW35 142 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 MYDGFQ969H8 173 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 RASD2Q96D21 266 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 TMEM101Q96IK0 257 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 CITED1Q99966 193 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 NAT10Q9H0A0 1025 aaKnown RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 METTL7AQ9H8H3 244 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 PAK1IP1Q9NWT1 392 aaPredicted RBP2.2□□□□□ -2.06
RFC4-213ENST00000489028 IL36GQ9NZH8 169 aa2.2□□□□□ -2.06
RFC4-213ENST00000489028 CD274Q9NZQ7 290 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms