RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PAQR6Q6TCH4 344 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 FUNDC1Q8IVP5 155 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 CADM2Q8N3J6 435 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 DNAJA3Q96EY1 480 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 PARPBPQ9NWS1 579 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 ASB6Q9NWX5 421 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.46
SPTLC1-207ENST00000488921 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.46
SPTLC1-207ENST00000488921 FLNAP21333 2647 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 A8MVM7 634 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 PLAUP00749 431 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 ARAFP10398 606 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 IMPDH2P12268 514 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 ETS2P15036 469 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 IGHV1-2P23083 117 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 ACAA2P42765 397 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 GCNT6Q5T4J0 391 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 CASP12Q6UXS9 341 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 BIVMQ86UB2 503 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 KRT73Q86Y46 540 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 CCDC103Q8IW40 242 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 AKAP1Q92667 903 aaKnown RBP eCLIP12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 MAL2Q969L2 176 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 FBXW5Q969U6 566 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 PERPQ96FX8 193 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 C18orf12Q96KH6 178 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 SIKE1Q9BRV8 207 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 SPATA5L1Q9BVQ7 753 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 SF3B5Q9BWJ5 86 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 GSX2Q9BZM3 304 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 NSRP1Q9H0G5 558 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 TAS2R16Q9NYV7 291 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 MALT1Q9UDY8 824 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 GMEB1Q9Y692 573 aa12.2□□□□□ -0.46
SPTLC1-207ENST00000488921 CIB4A0PJX0 185 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 LIPT2A6NK58 231 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 OR5H1A6NKK0 313 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 CCT8L1PA6NM43 557 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 EVPLLA8MZ36 301 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 CLOCKO15516 846 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 EDF1O60869 148 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 PGM3O95394 542 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 NUDT7P0C024 238 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 EDNRAP25101 427 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 PRKAR1BP31321 381 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 CEACAM7Q14002 265 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 OR7A5Q15622 319 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 AGKQ53H12 422 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 OTUD3Q5T2D3 398 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 OR7E24Q6IFN5 339 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 SERPINA11Q86U17 422 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 ZNF433Q8N7K0 673 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 PIF1Q9H611 641 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC25A37Q9NYZ2 338 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 UPB1Q9UBR1 384 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 FLVCR1Q9Y5Y0 555 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 ARID1AO14497 2285 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 ZFHX3Q15911 3703 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
SPTLC1-207ENST00000488921 A0A1W2PP18 115 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 GMNCA6NCL1 334 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 AQP7P3A6NL99 342 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 FAM171A2A8MVW0 826 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 FRS3O43559 492 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 RAMP1O60894 148 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 RAD51DO75771 328 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 VAMP5O95183 116 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 IGHV3-9P01782 118 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 PRG2P13727 222 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 PAX1P15863 534 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 ADSLP30566 484 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 LSP1P33241 339 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 PTH2RP49190 550 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 NCALDP61601 193 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 RPS4XP62701 263 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 CDK6Q00534 326 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 FAPQ12884 760 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC17A1Q14916 467 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 PAGE3Q5JUK9 113 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 C1QTNF12Q5T7M4 302 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 REEP3Q6NUK4 255 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 KLHL17Q6TDP4 642 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 SEZ6L2Q6UXD5 910 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 YTHDF3Q7Z739 585 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 CPLX4Q7Z7G2 160 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 MSRB3Q8IXL7 192 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 BHLHE22Q8NFJ8 381 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 NFKBIDQ8NI38 313 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 STK35Q8TDR2 534 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms