RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CASP12Q6UXS9 341 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 DLEU7Q6UYE1 221 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 C20orf204Q6ZNR8 217 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 RETREG3Q86VR2 466 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 COMTD1Q86VU5 262 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 KRT73Q86Y46 540 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 C3orf49Q96BT1 292 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 NAA11Q9BSU3 229 aaPredicted RBP15.69■□□□□ 0.1
ITGB1-215ENST00000488494 VPS13CQ709C8 3753 aa15.69■□□□□ 0.1
ITGB1-215ENST00000488494 LIPT2A6NK58 231 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 EVPLLA8MZ36 301 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 TMEM229AB2RXF0 380 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 CNOT4O95628 575 aaKnown RBP15.68■□□□□ 0.1
ITGB1-215ENST00000488494 PLAUP00749 431 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 GPIP06744 558 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 CD99P14209 185 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 AQP1P29972 269 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 ADAM8P78325 824 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 OTUD3Q5T2D3 398 aaPredicted RBP15.68■□□□□ 0.1
ITGB1-215ENST00000488494 FBXW9Q5XUX1 488 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 SEZ6L2Q6UXD5 910 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 ATG4DQ86TL0 474 aaPredicted RBP15.68■□□□□ 0.1
ITGB1-215ENST00000488494 WFDC11Q8NEX6 87 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 HSD17B8Q92506 261 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 SLC35B4Q969S0 331 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 TMEM204Q9BSN7 226 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 TMUB1Q9BVT8 246 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 TMEM120AQ9BXJ8 343 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 TMEM38AQ9H6F2 299 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 ADPRHL2Q9NX46 363 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 FLVCR1Q9Y5Y0 555 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 FREM1Q5H8C1 2179 aa15.68■□□□□ 0.1
ITGB1-215ENST00000488494 A8MVM7 634 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 SMPD2O60906 423 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 MRPL33O75394 65 aaKnown RBP15.67■□□□□ 0.1
ITGB1-215ENST00000488494 AKR7A3O95154 331 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 GPX2P18283 190 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 GGT1P19440 569 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 NTF4P34130 210 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 MTPNP58546 118 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 SLC17A1Q14916 467 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 ADRM1Q16186 407 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 C1orf140Q5VVS0 124 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 DHRS4L2Q6PKH6 230 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 KRTAP1-3Q8IUG1 177 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 PIGTQ969N2 578 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 USB1Q9BQ65 265 aaKnown RBP15.67■□□□□ 0.1
ITGB1-215ENST00000488494 SPATA5L1Q9BVQ7 753 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 RSPO3Q9BXY4 272 aaPredicted RBP15.67■□□□□ 0.1
ITGB1-215ENST00000488494 FGFR1OP2Q9NVK5 253 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 MALT1Q9UDY8 824 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 PRDM4Q9UKN5 801 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 NDUFAF1Q9Y375 327 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 RNF115Q9Y4L5 304 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 MED13LQ71F56 2210 aa15.67■□□□□ 0.1
ITGB1-215ENST00000488494 AQP7P3A6NL99 342 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 HS3ST1O14792 307 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 CLOCKO15516 846 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 RAD51DO75771 328 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 AHSA1O95433 338 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 TROVE2P10155 538 aaKnown RBP eCLIP15.66■□□□□ 0.1
ITGB1-215ENST00000488494 SLC6A2P23975 617 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 NFYCQ13952 458 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 SELPLGQ14242 412 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 PPA1Q15181 289 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 CYP51A1Q16850 503 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 RUNDC3AQ59EK9 446 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 DPP10Q8N608 796 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 ZNF433Q8N7K0 673 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-215ENST00000488494 TMEM99Q8N816 258 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 HIPK4Q8NE63 616 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 OR9K2Q8NGE7 335 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 CGREF1Q99674 301 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 PIP5K1AQ99755 562 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 TAPBPLQ9BX59 468 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 NGBQ9NPG2 151 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 ASB6Q9NWX5 421 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 RPS6KB2Q9UBS0 482 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 ANGPT4Q9Y264 503 aa15.66■□□□□ 0.1
ITGB1-215ENST00000488494 ZNF469Q96JG9 3925 aaPredicted RBP15.65■□□□□ 0.1
ITGB1-215ENST00000488494 PRORSD1PA6NEY8 169 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ELOA3DA6NLF2 546 aaPredicted RBP15.65■□□□□ 0.1
ITGB1-215ENST00000488494 CCT8L1PA6NM43 557 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 TPST1O60507 370 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 HTR2AP28223 471 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 HOXC12P31275 282 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 NCALDP61601 193 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 NKX6-1P78426 367 aaPredicted RBP15.65■□□□□ 0.1
ITGB1-215ENST00000488494 SF3A3Q12874 501 aaKnown RBP eCLIP15.65■□□□□ 0.1
ITGB1-215ENST00000488494 FAPQ12884 760 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ELOA3BQ3SY89 546 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 Q5PR19 223 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 GPAT4Q86UL3 456 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 PTOV1Q86YD1 416 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ARMC8Q8IUR7 673 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ELOA3Q8NG57 546 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 OR52E4Q8NGH9 312 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 AKAP1Q92667 903 aaKnown RBP eCLIP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms