RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 BCAS1O75363 584 aaPredicted RBP1.35□□□□□ -2.19
SMC4-220ENST00000488017 LRATO95237 230 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 PCCBP05166 539 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TSPY4P0CV99 314 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TSPY10P0CW01 314 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 CRISP2P16562 243 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 ATP6V1C1P21283 382 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 FGF9P31371 208 aaPredicted RBP1.35□□□□□ -2.19
SMC4-220ENST00000488017 P2RY1P47900 373 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 MNAT1P51948 309 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 AP3M2P53677 418 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 PRPS1P60891 318 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 SNTB2Q13425 540 aaKnown RBP1.35□□□□□ -2.19
SMC4-220ENST00000488017 NSUN5P1Q3KNT7 163 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 HSP90AA5PQ58FG0 334 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 GPRC6AQ5T6X5 926 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 C1orf146Q5VVC0 180 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 Q5W150 140 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 RFLNAQ6ZTI6 216 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 GPATCH11Q8N954 259 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 STXBP6Q8NFX7 210 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 OR4D9Q8NGE8 314 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 RAET1EQ8TD07 263 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TCTEX1D2Q8WW35 142 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 FGF11Q92914 225 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 RAB7BQ96AH8 199 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 DTNBP1Q96EV8 351 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 PELI1Q96FA3 418 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 RNF185Q96GF1 192 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 PKNOX2Q96KN3 472 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 C16orf45Q96MC5 204 aaPredicted RBP1.35□□□□□ -2.19
SMC4-220ENST00000488017 RIT2Q99578 217 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TSG101Q99816 390 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 ING2Q9H160 280 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 ZNF385DQ9H6B1 395 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 SLC17A5Q9NRA2 495 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 SLC35D1Q9NTN3 355 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 AIG1Q9NVV5 245 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 HPF1Q9NWY4 346 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 IL36GQ9NZH8 169 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 AIPL1Q9NZN9 384 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TMOD2Q9NZR1 351 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 MTRF1LQ9UGC7 380 aaKnown RBP1.35□□□□□ -2.19
SMC4-220ENST00000488017 LAMP5Q9UJQ1 280 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TBX21Q9UL17 535 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 TP53TG5Q9Y2B4 290 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 OR10H1Q9Y4A9 318 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 MAD1L1Q9Y6D9 718 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 KDRP35968 1356 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 PPIAL4EA0A075B759 164 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 A0A0U1RQS6 177 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 A0A1B0GWJ7 208 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 LRP5LA4QPB2 252 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 A6NIZ1 184 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 A8MUI8 341 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 NPIPA7E9PJI5 369 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 DCTN6O00399 190 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 XPO1O14980 1071 aaKnown RBP1.34□□□□□ -2.19
SMC4-220ENST00000488017 HCRTR1O43613 425 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 OR10H3O60404 316 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 TNFSF13O75888 250 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 MFN2O95140 757 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 H2BFMP0C1H6 154 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 NPIPA8P0DM63 369 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 PPIAL4FP0DN26 164 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 IGFBP3P17936 291 aaPredicted RBP1.34□□□□□ -2.19
SMC4-220ENST00000488017 MMP11P24347 488 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 RGS4P49798 205 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 KLK7P49862 253 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 DAP3P51398 398 aaKnown RBP1.34□□□□□ -2.19
SMC4-220ENST00000488017 CCR6P51684 374 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 HSD17B7P56937 341 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 RAP1BP61224 184 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 SELPLGQ14242 412 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 ARL6IP1Q15041 203 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 SLC25A52Q3SY17 297 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 NADK2Q4G0N4 442 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 KLF17Q5JT82 389 aaPredicted RBP1.34□□□□□ -2.19
SMC4-220ENST00000488017 C10orf120Q5SQS8 335 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 TPGS2Q68CL5 300 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 CES3Q6UWW8 571 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 ZNF836Q6ZNA1 936 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 ACP7Q6ZNF0 438 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 RALGPS2Q86X27 583 aaPredicted RBP1.34□□□□□ -2.19
SMC4-220ENST00000488017 ZDHHC21Q8IVQ6 265 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 MFSD6LQ8IWD5 586 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 CLEC4FQ8N1N0 589 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 C6orf223Q8N319 242 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 OR2L13Q8N349 312 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 PNKDQ8N490 385 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 CLDN19Q8N6F1 224 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 NKAPP1Q8N9T2 125 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 DUSP18Q8NEJ0 188 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 OR10A7Q8NGE5 316 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 OR2T34Q8NGX1 318 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 OR2L8Q8NGY9 312 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 OR1F12Q8NHA8 337 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 CTNNBL1Q8WYA6 563 aaPredicted RBP1.34□□□□□ -2.19
SMC4-220ENST00000488017 ST8SIA1Q92185 356 aa1.34□□□□□ -2.19
SMC4-220ENST00000488017 SH3YL1Q96HL8 342 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms