RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 RBBP9O75884 186 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 KIAA0754O94854 1291 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 RNH1P13489 461 aaKnown RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 KRT13P13646 458 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 CRISP2P16562 243 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ATP6V1C1P21283 382 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 UQCRC2P22695 453 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 NMT1P30419 496 aaKnown RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 HOXA9P31269 272 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 LEPP41159 167 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 PRKXP51817 358 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 CCDC173Q0VFZ6 552 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 SF3A2Q15428 464 aaKnown RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 FAM83EQ2M2I3 478 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 TRIM16LQ309B1 348 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 TP53I3Q53FA7 332 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 CCDC137Q6PK04 289 aaKnown RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ACOT7LQ6ZUV0 252 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 HMGN2P46Q86SG4 172 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 TPRA1Q86W33 373 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ZNF547Q8IVP9 402 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 SLC38A6Q8IZM9 456 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ARRDC1Q8N5I2 433 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ATP6V0D2Q8N8Y2 350 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 GPATCH11Q8N954 259 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ZNF709Q8N972 641 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 OR10G2Q8NGC3 310 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 RAET1EQ8TD07 263 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 SPRYD4Q8WW59 207 aaPredicted RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 FAM3CQ92520 227 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 C16orf45Q96MC5 204 aaPredicted RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ZNF641Q96N77 438 aaPredicted RBP1.89□□□□□ -2.11
CCDC66-221ENST00000487739 RIT2Q99578 217 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 GPA33Q99795 319 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 ELOVL3Q9HB03 270 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 SLC17A5Q9NRA2 495 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 AIPL1Q9NZN9 384 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 LAMP5Q9UJQ1 280 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 MAD1L1Q9Y6D9 718 aa1.89□□□□□ -2.11
CCDC66-221ENST00000487739 IQANK1A0A1B0GTG1 560 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 C11orf94C9JXX5 98 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 RS1O15537 224 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 OR10H3O60404 316 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 ECI2O75521 394 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 UGT2B17O75795 530 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 MFN2O95140 757 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 LRATO95237 230 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 LALBAP00709 142 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 TSPY4P0CV99 314 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 TSPY10P0CW01 314 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 ATP6V1B2P21281 511 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 OTX2P32243 289 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 AP3M2P53677 418 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 ACTA2P62736 377 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 ACTC1P68032 377 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 CHRNB3Q05901 458 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 SELPLGQ14242 412 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 CHRFAM7AQ494W8 412 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 ABCA11PQ4W5N1 156 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 HSP90AA5PQ58FG0 334 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 PIGGQ5H8A4 983 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 FAM71F2Q6NXP2 309 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 SVOPLQ8N434 492 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 PNKDQ8N490 385 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 CYB561D1Q8N8Q1 229 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 CATSPER1Q8NEC5 780 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 STXBP6Q8NFX7 210 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 RAB7BQ96AH8 199 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 DTNBP1Q96EV8 351 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 LINC00477Q96M19 166 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 EDEM2Q9BV94 578 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 NAT10Q9H0A0 1025 aaKnown RBP1.88□□□□□ -2.11
CCDC66-221ENST00000487739 ZNF385DQ9H6B1 395 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 VCPKMTQ9H867 229 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 SLC35D1Q9NTN3 355 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 TREM2Q9NZC2 230 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 TMOD2Q9NZR1 351 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 OPN4Q9UHM6 478 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 WIF1Q9Y5W5 379 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 CLSPNQ9HAW4 1339 aa1.88□□□□□ -2.11
CCDC66-221ENST00000487739 IGKV1D-8A0A087WSZ0 117 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 A0A1B0GUS0 222 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 A8MUI8 341 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 E7ESA3 106 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 LAD1O00515 517 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 XPO1O14980 1071 aaKnown RBP1.87□□□□□ -2.11
CCDC66-221ENST00000487739 BCAS1O75363 584 aaPredicted RBP1.87□□□□□ -2.11
CCDC66-221ENST00000487739 LGI1O95970 557 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 HEXBP07686 556 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 FGF9P31371 208 aaPredicted RBP1.87□□□□□ -2.11
CCDC66-221ENST00000487739 P2RY1P47900 373 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 DAP3P51398 398 aaKnown RBP1.87□□□□□ -2.11
CCDC66-221ENST00000487739 PLK1P53350 603 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 RPS14P62263 151 aaKnown RBP1.87□□□□□ -2.11
CCDC66-221ENST00000487739 TGFBR3Q03167 851 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 SNTB2Q13425 540 aaKnown RBP1.87□□□□□ -2.11
CCDC66-221ENST00000487739 NSUN5P1Q3KNT7 163 aa1.87□□□□□ -2.11
CCDC66-221ENST00000487739 SLC25A52Q3SY17 297 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms