RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CCND3P30281 292 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 SDC4P31431 198 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 IFNGR2P38484 337 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 P2RY2P41231 377 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 QARSP47897 775 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 NRIP1P48552 1158 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 EVX1P49640 407 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 COMPP49747 757 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 CCR8P51685 355 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 DLX5P56178 289 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 VSX2P58304 361 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 LINC00205P59089 165 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 MYL7Q01449 175 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 CACNG1Q06432 222 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 EXOSC2Q13868 293 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 INPP5JQ15735 1006 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 ZBTB6Q15916 424 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 CTF1Q16619 201 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 SOWAHAQ2M3V2 549 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 NHLRC3Q5JS37 347 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PIK3CD-AS1Q5SR53 167 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 MARC1Q5VT66 337 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 NADSYN1Q6IA69 706 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 APOBEC3HQ6NTF7 200 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 DENND1BQ6P3S1 775 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 MOXD1Q6UVY6 613 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 DPY19L2P2Q6ZN68 376 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 RNF165Q6ZSG1 346 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 STRADAQ7RTN6 431 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 LRRC70Q7Z2Q7 622 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 YRDCQ86U90 279 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 NAA40Q86UY6 237 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PAQR7Q86WK9 346 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 VRK2Q86Y07 508 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 CCDC117Q8IWD4 279 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 MTURNQ8N3F0 131 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 CCDC71LQ8N9Z2 235 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 FAM47BQ8NA70 645 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 STXBP6Q8NFX7 210 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 RDM1Q8NG50 284 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 OR4K14Q8NGD5 310 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 OR13J1Q8NGT2 312 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 OR5K1Q8NHB7 308 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 FAM110DQ8TAY7 271 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 SPPL2AQ8TCT8 520 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 LPAR1Q92633 364 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 ARRDC3Q96B67 414 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 SPSB1Q96BD6 273 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 FAF2Q96CS3 445 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 FBXO17Q96EF6 278 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 KTI12Q96EK9 354 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 SLC38A2Q96QD8 506 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 GAD1Q99259 594 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 SEMA3CQ99985 751 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 AIF1LQ9BQI0 150 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PIGQQ9BRB3 760 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 TRIM51Q9BSJ1 452 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PRRG3Q9BZD7 231 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PPIL3Q9H2H8 161 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 AAMDCQ9H7C9 122 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.97□□□□□ -1.61
COPS3-209ENST00000486810 CHRAC1Q9NRG0 131 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 ABCB8Q9NUT2 735 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 TAB2Q9NYJ8 693 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 SPG21Q9NZD8 308 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PDP1Q9P0J1 537 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 SLC17A7Q9P2U7 560 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 DUX4Q9UBX2 424 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 NUFIP1Q9UHK0 495 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 LEF1Q9UJU2 399 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 FBXO4Q9UKT5 387 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 CLEC4EQ9ULY5 219 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PRPF19Q9UMS4 504 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 SLC7A11Q9UPY5 501 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 LAMP3Q9UQV4 416 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 PRG3Q9Y2Y8 225 aaPredicted RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 ZNF337Q9Y3M9 751 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 TBL2Q9Y4P3 447 aaKnown RBP4.97□□□□□ -1.61
COPS3-209ENST00000486810 KIAA0586Q9BVV6 1533 aa4.97□□□□□ -1.61
COPS3-209ENST00000486810 DENND4AQ7Z401 1863 aa4.96□□□□□ -1.61
COPS3-209ENST00000486810 PALLDQ8WX93 1383 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 A0A1W2PQL4 384 aaPredicted RBP4.96□□□□□ -1.62
COPS3-209ENST00000486810 F8WDY8 70 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 WWP2O00308 870 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 PDCD5O14737 125 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 MRASO14807 208 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 TGFB1I1O43294 461 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 TPST1O60507 370 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 KHDRBS3O75525 346 aaKnown RBP4.96□□□□□ -1.62
COPS3-209ENST00000486810 OR2J2O76002 312 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 CLDN9O95484 217 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 AP2A1O95782 977 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 C6orf47O95873 294 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 MMP1P03956 469 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 RPLP0P05388 317 aaKnown RBP4.96□□□□□ -1.62
COPS3-209ENST00000486810 PSG1P11464 419 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 LYL1P12980 280 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 KCNE1P15382 129 aa4.96□□□□□ -1.62
COPS3-209ENST00000486810 PGAM1P18669 254 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms