RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TAS2R38P59533 333 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 TAS2R20P59543 309 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SIRPAP78324 504 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 BEX5Q5H9J7 111 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 C22orf39Q6P5X5 142 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 UNQ9370/PRO34162Q6UXP9 181 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 UBE3DQ7Z6J8 389 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SPAG16Q8N0X2 631 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 OR4C16Q8NGL9 310 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 PFN4Q8NHR9 129 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF689Q96CS4 500 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 HS6ST2Q96MM7 605 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 OR7D2Q96RA2 312 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 CPEB1Q9BZB8 566 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 FKRPQ9H9S5 495 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 C20orf141Q9NUB4 165 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SLC45A1Q9Y2W3 748 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 RAB19A4D1S5 217 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 FAM86C2PA6NEL3 165 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ACOD1A6NK06 481 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SULT1C2O00338 296 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 RNGTTO60942 597 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 NDUFS6O75380 124 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ERAL1O75616 437 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ZIC2O95409 532 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 POP4O95707 220 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SYN1P17600 705 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 NPBWR1P48145 328 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 GATMP50440 423 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 NR0B1P51843 470 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 MRPS10P82664 201 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 SRSF3P84103 164 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 DUSP2Q05923 314 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 PCGF3Q3KNV8 242 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF658BQ4V348 819 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 Q6ZNB5 142 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM173Q86WV6 379 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 NUDT13Q86X67 352 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 CCDC116Q8IYX3 515 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ARL14EPQ8N8R7 260 aaPredicted RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 GLYATL1Q969I3 302 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 INTS12Q96CB8 462 aaKnown RBP9.81□□□□□ -0.84
CCDC171-208ENST00000486641 BBS4Q96RK4 519 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 CD180Q99467 661 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF251Q9BRH9 671 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 TLNRD1Q9H1K6 362 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 RHBGQ9H310 441 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 ZFP57Q9NU63 452 aa9.81□□□□□ -0.84
CCDC171-208ENST00000486641 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 A0A1W2PS29 197 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 ANKRD61A6NGH8 418 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 H7C4K7 107 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 MAN2B1O00754 1011 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 GNB5O14775 395 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 LATS1O95835 1130 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 EDNRAP25101 427 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 OR1D2P34982 312 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 PSMB10P40306 273 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 SLC11A1P49279 550 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 ANXA11P50995 505 aaKnown RBP9.8□□□□□ -0.84
CCDC171-208ENST00000486641 CLDN2P57739 230 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 STX4Q12846 297 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 CRMP1Q14194 572 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 TSC22D1Q15714 1073 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 NDUFAF6Q330K2 333 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 LY6G6FQ5SQ64 297 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 WDR88Q6ZMY6 472 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 GLB1L2Q8IW92 636 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 KCNRGQ8N5I3 272 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 PXYLP1Q8TE99 480 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 DUSP19Q8WTR2 217 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 HAVCR1Q96D42 359 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 MRPL48Q96GC5 212 aaKnown RBP9.8□□□□□ -0.84
CCDC171-208ENST00000486641 PRSS27Q9BQR3 290 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 IL21RQ9HBE5 538 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 NIT2Q9NQR4 276 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 ASF1BQ9NVP2 202 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 KLHL28Q9NXS3 571 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF629Q9UEG4 869 aaPredicted RBP9.8□□□□□ -0.84
CCDC171-208ENST00000486641 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 PLXNA2O75051 1894 aa9.8□□□□□ -0.84
CCDC171-208ENST00000486641 OR6C76A6NM76 312 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF879B4DU55 563 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 LCMT2O60294 686 aaKnown RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 RBBP9O75884 186 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 CXCL14O95715 111 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 RAB40ALP0C0E4 278 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 C8orf89P0DMQ9 161 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 CBR1P16152 277 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 NFYBP25208 207 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 POLR2LP62875 67 aaKnown RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 PDZK1IP1Q13113 114 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 SNTB1Q13884 538 aaKnown RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 C10orf91Q5T1B1 145 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 PRAMEF8Q5VWM4 474 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms