RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CAPZA2P47755 286 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 TRIM61Q5EBN2 209 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 LCN1P1Q5VSP4 162 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 FAAH2Q6GMR7 532 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 DESI1Q6ICB0 168 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 NUP54Q7Z3B4 507 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 GPALPP1Q8IXQ4 340 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 ARIH2OSQ8N7S6 290 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 TRIM36Q9NQ86 728 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 QPCTLQ9NXS2 382 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 FBXL4Q9UKA2 621 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 HIF3AQ9Y2N7 669 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 UGT2A1Q9Y4X1 527 aa18.58■□□□□ 0.56
HPS3-206ENST00000486530 EXPH5Q8NEV8 1989 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 LOC110117498-PIK3R3F6TDL0 507 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 CTDSP2O14595 271 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 LRRTM2O43300 516 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 TIAF1O95411 115 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 MT-ND5P03915 603 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 HEXBP07686 556 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 MRPL3P09001 348 aaKnown RBP18.57■□□□□ 0.56
HPS3-206ENST00000486530 MXD1Q05195 221 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 ZNF528Q3MIS6 628 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 VASNQ6EMK4 673 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 PWWP2BQ6NUJ5 590 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 PLEKHG7Q6ZR37 379 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 SLC38A9Q8NBW4 561 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 SMPDL3BQ92485 455 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 TIMP4Q99727 224 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 SLC30A2Q9BRI3 323 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 TMED9Q9BVK6 235 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 RTN4RQ9BZR6 473 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 SEMA4CQ9C0C4 833 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 ADAM19Q9H013 955 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 MMP25Q9NPA2 562 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 NANSQ9NR45 359 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 POLHQ9Y253 713 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 ADAM18Q9Y3Q7 739 aa18.57■□□□□ 0.56
HPS3-206ENST00000486530 ASCC3Q8N3C0 2202 aaKnown RBP18.57■□□□□ 0.56
HPS3-206ENST00000486530 IDSB3KWA1 339 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 GYPBP06028 91 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 TACR3P29371 465 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 SDC2P34741 201 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 DCDP81605 110 aaKnown RBP18.56■□□□□ 0.56
HPS3-206ENST00000486530 LGALS3BPQ08380 585 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 HNRNPA0Q13151 305 aaKnown RBP18.56■□□□□ 0.56
HPS3-206ENST00000486530 GGTLC2Q14390 218 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 ANKRD37Q7Z713 158 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 MARCH3Q86UD3 253 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 C10orf53Q8N6V4 93 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 POMGNT2Q8NAT1 580 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 TP53INP1Q96A56 240 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 RNF31Q96EP0 1072 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 WDFY2Q96P53 400 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 TPK1Q9H3S4 243 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 SLC6A5Q9Y345 797 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 NCOR1O75376 2440 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 GABRPO00591 440 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 TBX1O43435 398 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 ONECUT2O95948 504 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 PGCP20142 388 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 NRG3P56975 720 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 TAS2R43P59537 309 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 RNF4P78317 190 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 EGR4Q05215 589 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 LYSMD2Q8IV50 215 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 IFI44Q8TCB0 444 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 KATNB1Q9BVA0 655 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 ABCB10Q9NRK6 738 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 PCDHGB6Q9Y5F9 930 aa18.56■□□□□ 0.56
HPS3-206ENST00000486530 ANKRD33BA6NCL7 494 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 OR6C70A6NIJ9 312 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 RGS5O15539 181 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 RNF13O43567 381 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 CDC40O60508 579 aaKnown RBP eCLIP18.55■□□□□ 0.56
HPS3-206ENST00000486530 ALOX12BO75342 701 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 CER1O95813 267 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 APEHP13798 732 aaKnown RBP18.55■□□□□ 0.56
HPS3-206ENST00000486530 TGM1P22735 817 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 EVI2BP34910 448 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 PSMD7P51665 324 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 ZNF85Q03923 595 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 CLPPQ16740 277 aaPredicted RBP18.55■□□□□ 0.56
HPS3-206ENST00000486530 GXYLT1Q4G148 440 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 SLC35D3Q5M8T2 416 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 SYT14Q8NB59 555 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 NPEPL1Q8NDH3 523 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 OR5W2Q8NH69 310 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 METTL21AQ8WXB1 218 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 AP3S1Q92572 193 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 NDEL1Q9GZM8 345 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 KLHL1Q9NR64 748 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 NOX1Q9Y5S8 564 aa18.55■□□□□ 0.56
HPS3-206ENST00000486530 IGHV3-20A0A0C4DH32 117 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 SNX4O95219 450 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 CLEC2LP0C7M8 214 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 ASAH2BP0C7U1 165 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 CD53P19397 219 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 ITPKBP27987 946 aa18.54■□□□□ 0.56
HPS3-206ENST00000486530 TNFSF8P32971 234 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms