RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 RAB8BQ92930 207 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 RAB39BQ96DA2 213 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 EGLN2Q96KS0 407 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 MS4A4EQ96PG1 132 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 GPA33Q99795 319 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 BTBD2Q9BX70 525 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 TRIM31Q9BZY9 425 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 TMEM45AQ9NWC5 275 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 KCNE5Q9UJ90 142 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 LEF1Q9UJU2 399 aaPredicted RBP12.93□□□□□ -0.34
U2AF1-211ENST00000486519 WIPI2Q9Y4P8 454 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 POLR3HQ9Y535 204 aaPredicted RBP12.93□□□□□ -0.34
U2AF1-211ENST00000486519 STX16-NPEPL1H3BU86 382 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 STX16O14662 325 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 ZNF264O43296 627 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
U2AF1-211ENST00000486519 CYP7B1O75881 506 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 OTCP00480 354 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 NGFP01138 241 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 CCNA2P20248 432 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 TYK2P29597 1187 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 LOXL3P58215 753 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 ILF2Q12905 390 aaKnown RBP12.92□□□□□ -0.34
U2AF1-211ENST00000486519 CBFBQ13951 182 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 SPIN4Q56A73 249 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 OTUD3Q5T2D3 398 aaPredicted RBP12.92□□□□□ -0.34
U2AF1-211ENST00000486519 OR4F5Q8NH21 305 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 CDKL2Q92772 493 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 POP5Q969H6 163 aaKnown RBP12.92□□□□□ -0.34
U2AF1-211ENST00000486519 ZHX1-C8orf76Q96EF9 292 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 CCDC106Q9BWC9 280 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 RASSF4Q9H2L5 321 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 CRLF2Q9HC73 371 aa12.92□□□□□ -0.34
U2AF1-211ENST00000486519 A0A096LPK6 155 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 CLPSL1A2RUU4 121 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 TRAPPC2LH3BP13 241 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 UPK3AO75631 287 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 IFI6P09912 130 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 UBL4AP11441 157 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 HSD3B1P14060 373 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 CBR1P16152 277 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 NR4A1P22736 598 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 GATA3P23771 443 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 HSD3B2P26439 372 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 SERPINB4P48594 390 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 SELENOPP49908 381 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 MRPS11P82912 194 aaKnown RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 PDZK1Q5T2W1 519 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 MROH9Q5TGP6 573 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 AAED1Q7RTV5 226 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 GSPT2Q8IYD1 628 aaKnown RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 TMEM45BQ96B21 275 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 KCNA7Q96RP8 456 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 MS4A5Q9H3V2 200 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 SERINC1Q9NRX5 453 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 ACER3Q9NUN7 267 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 PARPBPQ9NWS1 579 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 TESQ9UGI8 421 aaKnown RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 DTNAQ9Y4J8 743 aa12.91□□□□□ -0.34
U2AF1-211ENST00000486519 NUP214P35658 2090 aaPredicted RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 TET2Q6N021 2002 aaPredicted RBP12.91□□□□□ -0.34
U2AF1-211ENST00000486519 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 SACSQ9NZJ4 4579 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 A0A1B0GUS0 222 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 VSTM5A8MXK1 200 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 TMEM229AB2RXF0 380 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 CCDC188H7C350 402 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 RSL1D1O76021 490 aaKnown RBP12.9□□□□□ -0.34
U2AF1-211ENST00000486519 SEC14L2O76054 403 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 BCKDHAP12694 445 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 EVX1P49640 407 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 ATP12AP54707 1039 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 CCL8P80075 99 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 HLXQ14774 488 aaPredicted RBP12.9□□□□□ -0.34
U2AF1-211ENST00000486519 FIP1L1Q6UN15 594 aaKnown RBP12.9□□□□□ -0.34
U2AF1-211ENST00000486519 MDP1Q86V88 176 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 FAM169BQ8N8A8 192 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 OR9K2Q8NGE7 335 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 PYROXD1Q8WU10 500 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 SLC25A43Q8WUT9 341 aaPredicted RBP12.9□□□□□ -0.34
U2AF1-211ENST00000486519 ST8SIA1Q92185 356 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 PBKQ96KB5 322 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 TSPAN32Q96QS1 320 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 SERHL2Q9H4I8 314 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
U2AF1-211ENST00000486519 TANC2Q9HCD6 1990 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 H3BNH8 94 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 EIF4E2O60573 245 aaKnown RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 SBK3P0C264 359 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 HSD17B3P37058 310 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 ATP4BP51164 291 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 LASP1Q14847 261 aaKnown RBP12.89□□□□□ -0.35
U2AF1-211ENST00000486519 C3orf62Q6ZUJ4 267 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 POMGNT2Q8NAT1 580 aa12.89□□□□□ -0.35
U2AF1-211ENST00000486519 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms