RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 OTUD3Q5T2D3 398 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-208ENST00000486404 ZNF704Q6ZNC4 412 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-208ENST00000486404 C20orf204Q6ZNR8 217 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 HIPK4Q8NE63 616 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 ELOA3Q8NG57 546 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 SLC35B4Q969S0 331 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 PLPPR2Q96GM1 343 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
CHMP3-208ENST00000486404 CXXC4Q9H2H0 198 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 IKZF5Q9H5V7 419 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 TMEM38AQ9H6F2 299 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 FGFR1OP2Q9NVK5 253 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 BEX4Q9NWD9 120 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-208ENST00000486404 ADPRHL2Q9NX46 363 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 SELENONQ9NZV5 590 aa11.42□□□□□ -0.58
CHMP3-208ENST00000486404 SERPINB7O75635 380 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 CNOT4O95628 575 aaKnown RBP11.41□□□□□ -0.58
CHMP3-208ENST00000486404 IGHV3-9P01782 118 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 VIMP08670 466 aaKnown RBP11.41□□□□□ -0.58
CHMP3-208ENST00000486404 IMPDH2P12268 514 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 ADSLP30566 484 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-208ENST00000486404 RGS8P57771 180 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-208ENST00000486404 MTPNP58546 118 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 HOXC5Q00444 222 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 BNIP2Q12982 314 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 CEACAM7Q14002 265 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 C1orf140Q5VVS0 124 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 FBXW9Q5XUX1 488 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 PAQR6Q6TCH4 344 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 C22orf34Q6ZV56 151 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 GPAT4Q86UL3 456 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 ARMC8Q8IUR7 673 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 CCDC103Q8IW40 242 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 C11orf65Q8NCR3 313 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 BHLHE22Q8NFJ8 381 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-208ENST00000486404 RNF217Q8TC41 542 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 HSD17B8Q92506 261 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 PIGTQ969N2 578 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 C3orf49Q96BT1 292 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 MUCL1Q96DR8 90 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 CGREF1Q99674 301 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 ADAM19Q9H013 955 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 ZNF385DQ9H6B1 395 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 ESRP2Q9H6T0 727 aaKnown RBP11.41□□□□□ -0.58
CHMP3-208ENST00000486404 SLC52A3Q9NQ40 469 aa11.41□□□□□ -0.58
CHMP3-208ENST00000486404 CIB4A0PJX0 185 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 LIPT2A6NK58 231 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 CCT8L1PA6NM43 557 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 ZNF814B7Z6K7 855 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 CLOCKO15516 846 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 RAMP1O60894 148 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 SMPD2O60906 423 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 RAD51DO75771 328 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 GPX2P18283 190 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 CD53P19397 219 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 GGT1P19440 569 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 COX5AP20674 150 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 HOXC12P31275 282 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 ARFIP2P53365 341 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 SF3A3Q12874 501 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHMP3-208ENST00000486404 PPA1Q15181 289 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 MAPRE2Q15555 327 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 TAB1Q15750 504 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 ACKR1Q16570 336 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 DHRS4L2Q6PKH6 230 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 SSX8Q7RTT4 187 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 RANBP3LQ86VV4 465 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-208ENST00000486404 LSRQ86X29 649 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-208ENST00000486404 C10orf111Q8N326 155 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 DPP10Q8N608 796 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 OR52E4Q8NGH9 312 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 TSPEARQ8WU66 669 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 MED4Q9NPJ6 270 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 PARPBPQ9NWS1 579 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 ZNF446Q9NWS9 450 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 ASB6Q9NWX5 421 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 UPB1Q9UBR1 384 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 TESQ9UGI8 421 aaKnown RBP11.4□□□□□ -0.58
CHMP3-208ENST00000486404 CHST2Q9Y4C5 530 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 FLVCR1Q9Y5Y0 555 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 GMEB1Q9Y692 573 aa11.4□□□□□ -0.58
CHMP3-208ENST00000486404 AQP7P3A6NL99 342 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM229AB2RXF0 380 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 KLF4O43474 513 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 AKR7A3O95154 331 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 CD3EP07766 207 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 IGHV1-2P23083 117 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 EDNRAP25101 427 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 H3F3AP84243 136 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 GUCY1A3Q02108 690 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 RBBP4Q09028 425 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 TRMT5Q32P41 509 aaKnown RBP11.39□□□□□ -0.59
CHMP3-208ENST00000486404 MMEL1Q495T6 779 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 RUNDC3AQ59EK9 446 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 ALG10BQ5I7T1 473 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 PRR14LQ5THK1 2151 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms