RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	MEAF6	Q9HAF1	191 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	UTP6	Q9NYH9	597 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	CDH9	Q9ULB4	789 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	CLEC4A	Q9UMR7	237 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	SAMD4A	Q9UPU9	718 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	ASB3	Q9Y575	518 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	IFT172	Q9UG01	1749 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	FRMPD4	Q14CM0	1322 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	PCDH11X	Q9BZA7	1347 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	TONSL	Q96HA7	1378 aa		3.09	□□□□□ -1.92
VPS8-223	ENST00000485024	LOC400499	M0QZD8	3231 aa		3.09	□□□□□ -1.92
VPS8-223	ENST00000485024	FAM208A	Q9UK61	1670 aa	Known RBP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	FN1	P02751	2386 aa	Known RBP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	ESYT2	A0FGR8	921 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	METTL21EP	A6NDL7	271 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024		G3V3Y1	287 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	GOLGA8S	H3BPF8	625 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	LRRTM2	O43300	516 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	GPRIN2	O60269	458 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	SEMA4F	O95754	770 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	IL1B	P01584	269 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	CAPN1	P07384	714 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	PNMT	P11086	282 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	CCDC130	P13994	396 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	GCFC2	P16383	781 aa	Known RBP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	IMPDH1	P20839	514 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	SERPINA2	P20848	420 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	PBLD	P30039	288 aa	Predicted RBP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	NMT1	P30419	496 aa	Known RBP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	ACVR1B	P36896	505 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	TDO2	P48775	406 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	POU3F4	P49335	361 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	UBE2H	P62256	183 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	TNFRSF17	Q02223	184 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	RAB40B	Q12829	278 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	GLIPR1L2	Q4G1C9	344 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	C10orf120	Q5SQS8	335 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	CCDC183	Q5T5S1	534 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	CYS1	Q717R9	158 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	ZNF440	Q8IYI8	595 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	CLEC4F	Q8N1N0	589 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	OR4D5	Q8NGN0	318 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	VN1R17P	Q8TDU5	208 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	ARNTL2	Q8WYA1	636 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	MRPS31	Q92665	395 aa	Known RBP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	TOMM40L	Q969M1	308 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	C18orf12	Q96KH6	178 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	AMDHD1	Q96NU7	426 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	CCDC28B	Q9BUN5	200 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	ELOVL4	Q9GZR5	314 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	SGK2	Q9HBY8	427 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	DPM3	Q9P2X0	92 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	ZNF221	Q9UK13	617 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	RASD1	Q9Y272	281 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	NEUROG3	Q9Y4Z2	214 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	NUP155	O75694	1391 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	OTOGL	Q3ZCN5	2332 aa		3.08	□□□□□ -1.92
VPS8-223	ENST00000485024	DDX60L	Q5H9U9	1706 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	NRXN2	Q9P2S2	1712 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	PPL	O60437	1756 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	ZSCAN5B	A6NJL1	495 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	EFCAB7	A8K855	629 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024		E7ESA3	106 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024		E9PAM4	449 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024		E9PQ18	207 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	POLR2D	O15514	142 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	WBP4	O75554	376 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	KBTBD11	O94819	623 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	GJB5	O95377	273 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	CD55	P08174	381 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	NCF2	P19878	526 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	LAP3	P28838	519 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	HPCAL1	P37235	193 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	BDKRB1	P46663	353 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	ALDH3B2	P48448	385 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	FNTA	P49354	379 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	HNRNPA3	P51991	378 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	CDH4	P55283	916 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	RPL8	P62917	257 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	PEX6	Q13608	980 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	MXD4	Q14582	209 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	KCNJ11	Q14654	390 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	IMMT	Q16891	758 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	NHLRC3	Q5JS37	347 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	PVRIG	Q6DKI7	326 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	ZSCAN25	Q6NSZ9	544 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	PAQR6	Q6TCH4	344 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	VIT	Q6UXI7	678 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	VSTM4	Q8IW00	320 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	UBALD2	Q8IYN6	164 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	TCTEX1D2	Q8WW35	142 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	TRUB1	Q8WWH5	349 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	PIGC	Q92535	297 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	EFHD2	Q96C19	240 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	ZNF689	Q96CS4	500 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	RAB3C	Q96E17	227 aa		3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	PIWIL1	Q96J94	861 aa	Known RBP	3.07	□□□□□ -1.92
VPS8-223	ENST00000485024	ADNP	Q9H2P0	1102 aa		3.07	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms